Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0410 |
Symbol | |
ID | 6284224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 446787 |
End bp | 448337 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619974 |
Product | diguanylate cyclase |
Protein accession | YP_001894059 |
Protein GI | 187922417 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAC GAAAAGCCAT GGTGACGCGC CGACCGAACA TCGTGATTGC GATCAGTATC GTGCTGGCCA GTGCGATTCT TGCGATCGCC GTGTGGGTGC TGGCGCAGAT GCGCGACGAC GCATTGCGGC GCGCCCAGGA TTCGGTCTTC AACGTGTCGC TGCTGGTCGA GCGCGACGTG TCGCGCAATC TGGAGATTTA CGATCTCTCG CTGCGCGCGG TGATCGACGG TCTGAAACAG CCCGGCGTGC TGGAACTGGA TCCGGCCATC CGCCAGATGG TGTTGTTCGA CGGCTCGGCG AGCGCCAAAG ACATGGGCTC GATCCTCGTG ACCGACGAGG CCGGCAACAT CAAGTTCGAT TCGCAAGCCA CGCCGCCACG CCGCGTCAAT CTCTCCGACC GTGATTACTT CAAGGTGCAG CGGGACTCGA CCAACGTCGG CCTGTACATC AGCCACCCGT TTGTGCCCAA GGTCAGCGGC AAGGAAATCA GCATCGCGAT GAGCCGGCGC ATCACGCGGC CGGACGGCAG TTTCGGCGGC GTGGTGGTCG GCACCATGCG CCTCACCTAT TTCCGCAGGC TGTTCGCCGG CATGAATCTC GGCGCCGGCG GTTCGATGGC GCTGATGCTG AGCGACGGCA CGATGCTGAT GCGGCGCCCG TTCGATCCGA AAATCATCGG TATCAATCTG ACCGGCACCG CCAACTACTC GCGCTTCACC CAGCAGCCGA GCGGGGATTT CTTCGGCACG GCGGCGATCG ACGGCGTCGA GCGCTGGTAC GCGTTCCGTC ATATCGACAT GTATCCGCTG ATCCTCGACG TCGCGCTGTC CACGCGCGAT ATCTACGTGG AATGGCGGCA CCGCGCGTGG ATCATCGGTT CGCTGATCGC CGCGCTCGAC GTCACGATCA TCGCGCTGGC GGTTCTGTTC TCGTATCAAT TGCGATACCG CCGCGCAGCC GAAGAAGAGT TGCGCGTCTT GGCGCGCACC GACGGGCTGA CCGGCCTGAA CAATCGCCGC ACCTTCGAGG AACACGCGGA AGACGAGTGG CGTCGCGCGC AGCGCAACGC ATGGCCGCTG TCGATGCTGC TGATCGACGT CGACAGTTTC AAAGGTTTCA ACGACCTGTA CGGCCATTCC GCCGGCGACG ATGCGCTCAC GGCCGTGGCC CGCTGCATCT CGCAGAGCGT GCGGCGTCCG GGTGACACGG CGGCGCGCTA TGGCGGCGAA GAGTTCGCCG TGTTGCTGCC GGACACCGAC GAGACCGGCG CAGCTTTCAT CGCCGAGAAG ATTCGCGCGG CGGTTCAGGC GCTTCAGCTT CGCCACGTGG CAAGCTCGCA ACATGTGTTG ACCGTGAGCA TCGGTATCGC CACCACCCGA GGCGAGGCAT TCGCAACGAG CCGCGCCCTC CTGAACGCCG CCGACGACGC GCTATACGAA GCCAAAGATG CGGGCCGTAA TCGCGTGCTG AGCTATCGCA CCGTGACGCA CACTTCGCCC CGAGGCGGCG CCACGGTGAC ACCCAGCACC GAAACGCGCA ACTCCGTCTG A
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Protein sequence | MFERKAMVTR RPNIVIAISI VLASAILAIA VWVLAQMRDD ALRRAQDSVF NVSLLVERDV SRNLEIYDLS LRAVIDGLKQ PGVLELDPAI RQMVLFDGSA SAKDMGSILV TDEAGNIKFD SQATPPRRVN LSDRDYFKVQ RDSTNVGLYI SHPFVPKVSG KEISIAMSRR ITRPDGSFGG VVVGTMRLTY FRRLFAGMNL GAGGSMALML SDGTMLMRRP FDPKIIGINL TGTANYSRFT QQPSGDFFGT AAIDGVERWY AFRHIDMYPL ILDVALSTRD IYVEWRHRAW IIGSLIAALD VTIIALAVLF SYQLRYRRAA EEELRVLART DGLTGLNNRR TFEEHAEDEW RRAQRNAWPL SMLLIDVDSF KGFNDLYGHS AGDDALTAVA RCISQSVRRP GDTAARYGGE EFAVLLPDTD ETGAAFIAEK IRAAVQALQL RHVASSQHVL TVSIGIATTR GEAFATSRAL LNAADDALYE AKDAGRNRVL SYRTVTHTSP RGGATVTPST ETRNSV
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