| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0410 |
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| Symbol | |
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| ID | 6284224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 446787 |
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| End bp | 448337 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619974 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001894059 |
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| Protein GI | 187922417 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAC GAAAAGCCAT GGTGACGCGC CGACCGAACA TCGTGATTGC GATCAGTATC
GTGCTGGCCA GTGCGATTCT TGCGATCGCC GTGTGGGTGC TGGCGCAGAT GCGCGACGAC
GCATTGCGGC GCGCCCAGGA TTCGGTCTTC AACGTGTCGC TGCTGGTCGA GCGCGACGTG
TCGCGCAATC TGGAGATTTA CGATCTCTCG CTGCGCGCGG TGATCGACGG TCTGAAACAG
CCCGGCGTGC TGGAACTGGA TCCGGCCATC CGCCAGATGG TGTTGTTCGA CGGCTCGGCG
AGCGCCAAAG ACATGGGCTC GATCCTCGTG ACCGACGAGG CCGGCAACAT CAAGTTCGAT
TCGCAAGCCA CGCCGCCACG CCGCGTCAAT CTCTCCGACC GTGATTACTT CAAGGTGCAG
CGGGACTCGA CCAACGTCGG CCTGTACATC AGCCACCCGT TTGTGCCCAA GGTCAGCGGC
AAGGAAATCA GCATCGCGAT GAGCCGGCGC ATCACGCGGC CGGACGGCAG TTTCGGCGGC
GTGGTGGTCG GCACCATGCG CCTCACCTAT TTCCGCAGGC TGTTCGCCGG CATGAATCTC
GGCGCCGGCG GTTCGATGGC GCTGATGCTG AGCGACGGCA CGATGCTGAT GCGGCGCCCG
TTCGATCCGA AAATCATCGG TATCAATCTG ACCGGCACCG CCAACTACTC GCGCTTCACC
CAGCAGCCGA GCGGGGATTT CTTCGGCACG GCGGCGATCG ACGGCGTCGA GCGCTGGTAC
GCGTTCCGTC ATATCGACAT GTATCCGCTG ATCCTCGACG TCGCGCTGTC CACGCGCGAT
ATCTACGTGG AATGGCGGCA CCGCGCGTGG ATCATCGGTT CGCTGATCGC CGCGCTCGAC
GTCACGATCA TCGCGCTGGC GGTTCTGTTC TCGTATCAAT TGCGATACCG CCGCGCAGCC
GAAGAAGAGT TGCGCGTCTT GGCGCGCACC GACGGGCTGA CCGGCCTGAA CAATCGCCGC
ACCTTCGAGG AACACGCGGA AGACGAGTGG CGTCGCGCGC AGCGCAACGC ATGGCCGCTG
TCGATGCTGC TGATCGACGT CGACAGTTTC AAAGGTTTCA ACGACCTGTA CGGCCATTCC
GCCGGCGACG ATGCGCTCAC GGCCGTGGCC CGCTGCATCT CGCAGAGCGT GCGGCGTCCG
GGTGACACGG CGGCGCGCTA TGGCGGCGAA GAGTTCGCCG TGTTGCTGCC GGACACCGAC
GAGACCGGCG CAGCTTTCAT CGCCGAGAAG ATTCGCGCGG CGGTTCAGGC GCTTCAGCTT
CGCCACGTGG CAAGCTCGCA ACATGTGTTG ACCGTGAGCA TCGGTATCGC CACCACCCGA
GGCGAGGCAT TCGCAACGAG CCGCGCCCTC CTGAACGCCG CCGACGACGC GCTATACGAA
GCCAAAGATG CGGGCCGTAA TCGCGTGCTG AGCTATCGCA CCGTGACGCA CACTTCGCCC
CGAGGCGGCG CCACGGTGAC ACCCAGCACC GAAACGCGCA ACTCCGTCTG A
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| Protein sequence | MFERKAMVTR RPNIVIAISI VLASAILAIA VWVLAQMRDD ALRRAQDSVF NVSLLVERDV
SRNLEIYDLS LRAVIDGLKQ PGVLELDPAI RQMVLFDGSA SAKDMGSILV TDEAGNIKFD
SQATPPRRVN LSDRDYFKVQ RDSTNVGLYI SHPFVPKVSG KEISIAMSRR ITRPDGSFGG
VVVGTMRLTY FRRLFAGMNL GAGGSMALML SDGTMLMRRP FDPKIIGINL TGTANYSRFT
QQPSGDFFGT AAIDGVERWY AFRHIDMYPL ILDVALSTRD IYVEWRHRAW IIGSLIAALD
VTIIALAVLF SYQLRYRRAA EEELRVLART DGLTGLNNRR TFEEHAEDEW RRAQRNAWPL
SMLLIDVDSF KGFNDLYGHS AGDDALTAVA RCISQSVRRP GDTAARYGGE EFAVLLPDTD
ETGAAFIAEK IRAAVQALQL RHVASSQHVL TVSIGIATTR GEAFATSRAL LNAADDALYE
AKDAGRNRVL SYRTVTHTSP RGGATVTPST ETRNSV
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