Gene Bphyt_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0407 
Symbol 
ID6281179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp442953 
End bp443750 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID642619970 
Producttransport-associated 
Protein accessionYP_001894056 
Protein GI187922414 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAT TCCGCGTCAA GAAGACACTG GTGAGAACCG TGCTGGTGGT TGGGTTCGCG 
GCGGGGCTGT CCGCAACGTT GCAGGGTTGC TTTCTCGCCG TTGCCGGCGC GGCGGGCGGC
AGCGCGCTGG TGGCGACCGA CCGGCGCACG CTCGGCGCAC AGACCGAGGA TCGCGAGCTG
CAGGTGAAGG CGCTCTCGCA GATCAGCCAG AACTTGCCCG ACAACGCGCA CGTCAACGTG
ACCGTGTTCA ATCGTCGCGT GCTGCTGACC GGTGAAGTGG CGGGCGACGT GTCGAAGCAA
CGCGCGGAGA CCATCGTGCG TGGCCTGAAC AACGTCAGCA CGATCGTCAA CGAACTGACG
ATCATGCCGG CCAGCTCGTT CTCGTCGCGC ACCAATGACA CTTACCTCGA GACGCGTGTG
AAGACCGCGC TGATCGCCGA GAAGAACATT TCGGCGAACA ACTTCAAGGT GGTGGCCGAG
CGCGGCTCGG TGTATCTGAT GGGCCTCGTC ACCATGGACG AAGGCAATCG TGGCGCCGAC
GTCGCGAGCC GTGTGCCGGG CGTGGTGCAG GTCGTGAAGG TGTTCCAGTA CATTCAGCCG
GCGGAAGCCG CGGCGGCTGC CGCCGCAGCG GGGACGGCGC CCGTAGCGGC GGCTTCGCAA
CCGGACGCGA GCGCGCCGAC CGTCGGCGCT ATTCCTGATT CGTCGGTGAG TTCGCGGCCG
CTCGAACAGC AGGCCCCCGC GCCGGTCACC AATTCGAACG CGGTGCATCC AGGGAATCCG
AAGGCGACGA CGCCATGA
 
Protein sequence
MSVFRVKKTL VRTVLVVGFA AGLSATLQGC FLAVAGAAGG SALVATDRRT LGAQTEDREL 
QVKALSQISQ NLPDNAHVNV TVFNRRVLLT GEVAGDVSKQ RAETIVRGLN NVSTIVNELT
IMPASSFSSR TNDTYLETRV KTALIAEKNI SANNFKVVAE RGSVYLMGLV TMDEGNRGAD
VASRVPGVVQ VVKVFQYIQP AEAAAAAAAA GTAPVAAASQ PDASAPTVGA IPDSSVSSRP
LEQQAPAPVT NSNAVHPGNP KATTP