Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0407 |
Symbol | |
ID | 6281179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 442953 |
End bp | 443750 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619970 |
Product | transport-associated |
Protein accession | YP_001894056 |
Protein GI | 187922414 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAT TCCGCGTCAA GAAGACACTG GTGAGAACCG TGCTGGTGGT TGGGTTCGCG GCGGGGCTGT CCGCAACGTT GCAGGGTTGC TTTCTCGCCG TTGCCGGCGC GGCGGGCGGC AGCGCGCTGG TGGCGACCGA CCGGCGCACG CTCGGCGCAC AGACCGAGGA TCGCGAGCTG CAGGTGAAGG CGCTCTCGCA GATCAGCCAG AACTTGCCCG ACAACGCGCA CGTCAACGTG ACCGTGTTCA ATCGTCGCGT GCTGCTGACC GGTGAAGTGG CGGGCGACGT GTCGAAGCAA CGCGCGGAGA CCATCGTGCG TGGCCTGAAC AACGTCAGCA CGATCGTCAA CGAACTGACG ATCATGCCGG CCAGCTCGTT CTCGTCGCGC ACCAATGACA CTTACCTCGA GACGCGTGTG AAGACCGCGC TGATCGCCGA GAAGAACATT TCGGCGAACA ACTTCAAGGT GGTGGCCGAG CGCGGCTCGG TGTATCTGAT GGGCCTCGTC ACCATGGACG AAGGCAATCG TGGCGCCGAC GTCGCGAGCC GTGTGCCGGG CGTGGTGCAG GTCGTGAAGG TGTTCCAGTA CATTCAGCCG GCGGAAGCCG CGGCGGCTGC CGCCGCAGCG GGGACGGCGC CCGTAGCGGC GGCTTCGCAA CCGGACGCGA GCGCGCCGAC CGTCGGCGCT ATTCCTGATT CGTCGGTGAG TTCGCGGCCG CTCGAACAGC AGGCCCCCGC GCCGGTCACC AATTCGAACG CGGTGCATCC AGGGAATCCG AAGGCGACGA CGCCATGA
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Protein sequence | MSVFRVKKTL VRTVLVVGFA AGLSATLQGC FLAVAGAAGG SALVATDRRT LGAQTEDREL QVKALSQISQ NLPDNAHVNV TVFNRRVLLT GEVAGDVSKQ RAETIVRGLN NVSTIVNELT IMPASSFSSR TNDTYLETRV KTALIAEKNI SANNFKVVAE RGSVYLMGLV TMDEGNRGAD VASRVPGVVQ VVKVFQYIQP AEAAAAAAAA GTAPVAAASQ PDASAPTVGA IPDSSVSSRP LEQQAPAPVT NSNAVHPGNP KATTP
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