Gene Bphyt_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0406 
Symbol 
ID6281178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp442339 
End bp442926 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID642619969 
Productphosphoheptose isomerase 
Protein accessionYP_001894055 
Protein GI187922413 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCG AACGCATTCA ACAACACTTC CGCGACAGCG CGGCAGTCAA ACTCGAAGCC 
CTCGAAACAC TGTCGATGCC GATCGCCGCT GCGATCGACG CGATGTTCGC CGCGCTGGCC
AACGGCAATC GCATTCTCGC GTGCGGCAAC GGCGGCTCGG CGGCCGACGC GCAGCACTTC
GCCGCCGAAC TGATGGGCCG CTTCGAGCGC GAGCGGCCCG GCTTGCCGGC AATCGCGCTG
ACCACGGACA CCTCGGTGTT GACCGCCATC GCCAACGACT ATTCGTTCGA GCAGGTTTTC
TCGAAGCAGG TCTGGGCGCT CGGCCAGCCG GGCGACGTGC TGCTGGCAAT CACCACGTCC
GGCAATTCCG CCAACGTGCT CGCCGCGATC GAGGCCGCGC ACGAGCGCGA AATGATCGTG
GTCGCGCTGA CCGGCAAGGG CGGCGGACGC ATGCAGGAAG TATTGAGCGA TACCGATATT
CATGTGTGCG TGCCGTCGGA TCGCACCGCG CGTATTCAGG AAGTGCATTT GCTGACCATC
CATTGTCTGT GCGACGGCAT CGATGCCATG TTGCTGGGCG AAGACTGA
 
Protein sequence
MSVERIQQHF RDSAAVKLEA LETLSMPIAA AIDAMFAALA NGNRILACGN GGSAADAQHF 
AAELMGRFER ERPGLPAIAL TTDTSVLTAI ANDYSFEQVF SKQVWALGQP GDVLLAITTS
GNSANVLAAI EAAHEREMIV VALTGKGGGR MQEVLSDTDI HVCVPSDRTA RIQEVHLLTI
HCLCDGIDAM LLGED