Gene Bphyt_0403 details

Gene Information

• Locus tag: Bphyt_0403
• ID: 6281175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia phytofirmans PsJN
• Kingdom: Bacteria
• Replicon accession: NC_010681
• Strand: +
• Start bp: 440007
• End bp: 440609
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642619966
• Product: rare lipoprotein A
• Protein accession: YP_001894052
• Protein GI: 187922410
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0797] Lipoproteins
• TIGRFAM ID: [TIGR00413] rare lipoprotein A

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAACTC GGTTATCCCG TGGTCTGGGG ACTCTTTTTG CCTTTTTTGT GCTGGCGGGT 
TGCGCCACGC CTCCGGGCGC AGGTAACACG TCGGAAAGCG GCGTGCCGCA AAGCACGAAA 
TTGACGCAGG CGGGCTCCTT CGGACCGCAA GCTTTCGGTA GCGCGCCGGC CTCCGACGCG 
ACCGCCCAAG GCTCGTCGCT GGCCGATGCG AAGCCTCTCA CCGATGAAGG TTCCGGCATT 
TCGGACTTTC ATCAGACCGG TCGCGCTTCG TGGTACGGCC GCGGCTTCCA TGGCCGCCGT 
ACGGCCAACG GCGAACGCTA CGACATGCAC GCGCTGACCG CGGCACATCG TACGTTGCCG 
CTCGGCTCTT ATGTGCGCGT GACCAATCCG GCCACGTCGC GCTCGGTGGT CGTGCGTATC 
AACGACCGTG GTCCGTATGC GCGTGGCCGC GTGATCGATC TTTCCATGGC TGCCGCGTCC 
GCGTTGAACA TGCGCCATGC CGGTACGGCA CGGGTGCAGA TCGAAGGTCT GACGCAGCAG 
GAAGCACGCG ACGCGCGTAA TGAAATGCTG GCGTCGAATT CGGATTCGAC CGCACAGAAG 
TGA 

 

Protein sequence

MKTRLSRGLG TLFAFFVLAG CATPPGAGNT SESGVPQSTK LTQAGSFGPQ AFGSAPASDA 
TAQGSSLADA KPLTDEGSGI SDFHQTGRAS WYGRGFHGRR TANGERYDMH ALTAAHRTLP 
LGSYVRVTNP ATSRSVVVRI NDRGPYARGR VIDLSMAAAS ALNMRHAGTA RVQIEGLTQQ 
EARDARNEML ASNSDSTAQK