Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0392 |
Symbol | |
ID | 6282312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 427454 |
End bp | 428554 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642619955 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_001894041 |
Protein GI | 187922399 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAG GCAGTTTTGT GACGCCGTTT GCGGAGCGTT TCGGGGTGCG TGTGCCAGTC GTGCAGGCAC CGATGGCGGG CGCGACGACG CCGGCAATGG TGGCCGCGGT ATCGAATGCC GGCGGTCTCG GTTTTCTGGC GGGCGCGGCG CTCTCGCCCG AGAAGATCGC GAGCGAAGTC GCGGCGATTC GCGCGCTGAC GGATCGTCCG TTCGGCGTGA ATCTGTTCGT GCTCGAACCG GCCACGCCCG ACGACGCGAC CGTGCGTACC GCGCTCGAAG CCATCGATCC CTTGCGCCAT GATCTCGGTT TGCCGCCGGG CGCTCCGCTT GCACGCTACG CGCCGGATTT CCGCGCGCAA CTGGACATGC TGATCGAATT GCGCGTGCCG CTGGCGAGCT TCACATTCGG CTTGCTTGCG GCCGACGACG TCGCCCGTTT GCACGCGAAC GGCCTATATG TAATAGGCAC CGCGACGCAC GCCGCCGAAG GCGTGGCCTG GCGCGACGCG GGCGCCGATG CGATTGTCGC GCAAGGCGCG GAGGCCGGTG CGCATCGAGG CACATTCATC GGCGCATTCG AAGATGCGCT GGTCGGCACG CTCGCGCTCG TGCCGCAAGT CGTCGACGCG ACCGGGCTGC CGGTGCTCGC CGCCGGCGGC ATCATGGATG GACGCGGCAT CGTCGCCGCG CTTGCGCTCG GCGCGCAAGC CGCGGTAATG GGCACCGCGT TTCTCACCTG TCACGAAAGC GCGATTCCAC AGGCATGGAA AACCCGCGTG CGGTCCACCT CCGACACGTC GACTTCGGTC ACGCGCGCGA TCACCGGCCG CCATGCCCGC GGCATACGCA ATCCGTTGAT GCAGCGGTTG AGCGAAGCGC CGCAGAAGAT CGCGCCGTAC CCGGTGCAAA ACGCGTTGAC GCAGGAGTTG CGGCAAACCG CGAGCCGCGC GGAAAACAGC GACTATCTCT CGCTATGGTC GGGCCAGGGC GCGCCTTTGG GCCGCGCCCG CCGCGAAGAT ATCGGAGCCG CCGAACTGAT TGGCCAACTC GAACACGAAT GGCGCGAGGC GACCGCGCGC ATCGCCGCGT TCAAATGCTG A
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Protein sequence | MSEGSFVTPF AERFGVRVPV VQAPMAGATT PAMVAAVSNA GGLGFLAGAA LSPEKIASEV AAIRALTDRP FGVNLFVLEP ATPDDATVRT ALEAIDPLRH DLGLPPGAPL ARYAPDFRAQ LDMLIELRVP LASFTFGLLA ADDVARLHAN GLYVIGTATH AAEGVAWRDA GADAIVAQGA EAGAHRGTFI GAFEDALVGT LALVPQVVDA TGLPVLAAGG IMDGRGIVAA LALGAQAAVM GTAFLTCHES AIPQAWKTRV RSTSDTSTSV TRAITGRHAR GIRNPLMQRL SEAPQKIAPY PVQNALTQEL RQTASRAENS DYLSLWSGQG APLGRARRED IGAAELIGQL EHEWREATAR IAAFKC
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