Gene Bphyt_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0392 
Symbol 
ID6282312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp427454 
End bp428554 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content67% 
IMG OID642619955 
Product2-nitropropane dioxygenase NPD 
Protein accessionYP_001894041 
Protein GI187922399 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG GCAGTTTTGT GACGCCGTTT GCGGAGCGTT TCGGGGTGCG TGTGCCAGTC 
GTGCAGGCAC CGATGGCGGG CGCGACGACG CCGGCAATGG TGGCCGCGGT ATCGAATGCC
GGCGGTCTCG GTTTTCTGGC GGGCGCGGCG CTCTCGCCCG AGAAGATCGC GAGCGAAGTC
GCGGCGATTC GCGCGCTGAC GGATCGTCCG TTCGGCGTGA ATCTGTTCGT GCTCGAACCG
GCCACGCCCG ACGACGCGAC CGTGCGTACC GCGCTCGAAG CCATCGATCC CTTGCGCCAT
GATCTCGGTT TGCCGCCGGG CGCTCCGCTT GCACGCTACG CGCCGGATTT CCGCGCGCAA
CTGGACATGC TGATCGAATT GCGCGTGCCG CTGGCGAGCT TCACATTCGG CTTGCTTGCG
GCCGACGACG TCGCCCGTTT GCACGCGAAC GGCCTATATG TAATAGGCAC CGCGACGCAC
GCCGCCGAAG GCGTGGCCTG GCGCGACGCG GGCGCCGATG CGATTGTCGC GCAAGGCGCG
GAGGCCGGTG CGCATCGAGG CACATTCATC GGCGCATTCG AAGATGCGCT GGTCGGCACG
CTCGCGCTCG TGCCGCAAGT CGTCGACGCG ACCGGGCTGC CGGTGCTCGC CGCCGGCGGC
ATCATGGATG GACGCGGCAT CGTCGCCGCG CTTGCGCTCG GCGCGCAAGC CGCGGTAATG
GGCACCGCGT TTCTCACCTG TCACGAAAGC GCGATTCCAC AGGCATGGAA AACCCGCGTG
CGGTCCACCT CCGACACGTC GACTTCGGTC ACGCGCGCGA TCACCGGCCG CCATGCCCGC
GGCATACGCA ATCCGTTGAT GCAGCGGTTG AGCGAAGCGC CGCAGAAGAT CGCGCCGTAC
CCGGTGCAAA ACGCGTTGAC GCAGGAGTTG CGGCAAACCG CGAGCCGCGC GGAAAACAGC
GACTATCTCT CGCTATGGTC GGGCCAGGGC GCGCCTTTGG GCCGCGCCCG CCGCGAAGAT
ATCGGAGCCG CCGAACTGAT TGGCCAACTC GAACACGAAT GGCGCGAGGC GACCGCGCGC
ATCGCCGCGT TCAAATGCTG A
 
Protein sequence
MSEGSFVTPF AERFGVRVPV VQAPMAGATT PAMVAAVSNA GGLGFLAGAA LSPEKIASEV 
AAIRALTDRP FGVNLFVLEP ATPDDATVRT ALEAIDPLRH DLGLPPGAPL ARYAPDFRAQ
LDMLIELRVP LASFTFGLLA ADDVARLHAN GLYVIGTATH AAEGVAWRDA GADAIVAQGA
EAGAHRGTFI GAFEDALVGT LALVPQVVDA TGLPVLAAGG IMDGRGIVAA LALGAQAAVM
GTAFLTCHES AIPQAWKTRV RSTSDTSTSV TRAITGRHAR GIRNPLMQRL SEAPQKIAPY
PVQNALTQEL RQTASRAENS DYLSLWSGQG APLGRARRED IGAAELIGQL EHEWREATAR
IAAFKC