Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0363 |
Symbol | |
ID | 6283553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 394367 |
End bp | 396268 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619926 |
Product | hypothetical protein |
Protein accession | YP_001894012 |
Protein GI | 187922370 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTCT CCTTTCTGGT CTGTCTTGCA TCTCTCGGCT GGCTTGCCGA CATCCACGGC GCGGGCGCGA GCGTTCCCGC CAAACTGGAC GATCCGTACA CCAACGAAGG CGAGACGCAA ACCTTCACCG TCAACGCCGA CGGCTCCTTC ACCAAGCTCG ATTCGTTGAC GCTGCACGTG AATAACGAAG CCGGCGTCGC GCGGGTTGCG CAGCAATACG TCTGGTTCAA CCGCAACATG GCGGACGTGC AGATTCTCGA GGCCTACACG ATCACTGCCG ACGGCGTGCG TCACGACGTG CAGCCCGAGC AGATCCGCAA CGTCCAGGAA GCGCGTTCGT TCGACGCGCC GATGTTCCAG GACATCCAGG AAAAGGTGAT CGTGTTCCCC GCCGTCGAAC CGGGCGCACG CGTACATCTC ACCTATCGCA AGACGCAGAA ACAGCCGATC GTGCCCGGCG AATTCAGCGA CTTCACACCA CCCGATCTCG CGCCGACGCA TAACTTCCGC CTGATCTACG ATCTGCCCGC CGACAAGCCG CTGTATGCCG ACGCGCGCGG TTTCACCGTC GTGCAACCCG TGACGCGCGA CGGCCGCACG CGCTACGAAT ATCGCTACGA CAAGGCGCAC TTCAGCCGGC TGGAACGCGG CTCGGTTGCA TACGTTTCGT ATGGCGACCG GCTGATGGTC TCGACCTTCC CCGACTACGC CGCGTTCGCC GCGAACTACC GCGAATCGGC AGTGGACCCG AGCGCGCACG ACGCCGCCGT CACGCGTCTC GCGCAACAGC TCACCGCGCA CGACCGCACG TCGCGCGACA AGGCCAAGAC GCTGTACGAC TGGGTGCGCC GCAACGTGCG CTATGTGGCG ATCAATGTCG GACGCGGCGC GGTCGTGCCG CACGGCGCGA GCGCGGTGCT CGCGAATCGC TACGGCGATT GCAAGGATCA CGTGGCCTTG TATGGCGCGC TGCTCGACGC GGCCGGCGTG CGCAACGAGC CGGCCCTGAT CAGCAGCGGC ACGATCTACA CGCTGCCGAG CGTGCCGGGC TACGGCGTCA TCAATCACAT CATTACGTGG CTGCCGGATT TGCAGCAGTA CGTCGACTCG ACCGCCTCGA ATATCGAGTT CGGTTTTCTG CCGTCGTCCG ATATGAACCG GCCCACCGTG CTCGTCGGCG AGCGCGTGCT CTCGCGCACG CCGGCAACCG CGTTCATGAC ACGCAGCACC GATCTGTCGA TCAAGGTCGA ACCGGATGGC TCGGCGAGCT TCACGTATCG GCTGGAAGCG GCGGGCGCTT CGGCTGAACA GGCGCGCGCG ATGTTGCGCA CGCAGACGCC CGCGCAACGC GAGGAGTCGA TTCAGGCGGA ACTGCGCAGC GCCAACCTGC GTGGCACCGC GACGCTCGCC ACCAATGACC TCAGCGTCGC CGACGGCCCG CTCGTCATTA CGATGAAAGG CACGCTGGAA AGTCTCGTGG TGCCGGGCGC GGCGGCGTCG ATTCCAGCGT TGACGAGTCT GGCCGGCGGC TTCGCCGCGG ATACGCGTTA CTGGCTCGGC GAGCGTCAGC GCACGCAGCC GTTCGTCTGT CACAACCTGG CGTTGCACGA ACGTGCGCGC ATCGAATTGC CCGCCAATTT TCACGTACTC GACATGCCGG AGGCGAAACG AACCCAGGAT CGTTTCGTCG ATTTCCAGTC GCAATACACG TTCGATCCGC TCAGCAACGT CGTCACGATG AGCCGCGAGG GCGCCACGCA TTTCGATAGC GACGTCTGCA CGCCCCAAGA CTTCGAGCAG ATGCGCCCCG CGATCGAAGC GATCGGGCGC GACGTGCGAG CGGAGGTGAT CGTCAGATCG ACGCTGGTGG AGTCGTCGAG TGTTGCTGCG CAGGCGCCGT GA
|
Protein sequence | MRLSFLVCLA SLGWLADIHG AGASVPAKLD DPYTNEGETQ TFTVNADGSF TKLDSLTLHV NNEAGVARVA QQYVWFNRNM ADVQILEAYT ITADGVRHDV QPEQIRNVQE ARSFDAPMFQ DIQEKVIVFP AVEPGARVHL TYRKTQKQPI VPGEFSDFTP PDLAPTHNFR LIYDLPADKP LYADARGFTV VQPVTRDGRT RYEYRYDKAH FSRLERGSVA YVSYGDRLMV STFPDYAAFA ANYRESAVDP SAHDAAVTRL AQQLTAHDRT SRDKAKTLYD WVRRNVRYVA INVGRGAVVP HGASAVLANR YGDCKDHVAL YGALLDAAGV RNEPALISSG TIYTLPSVPG YGVINHIITW LPDLQQYVDS TASNIEFGFL PSSDMNRPTV LVGERVLSRT PATAFMTRST DLSIKVEPDG SASFTYRLEA AGASAEQARA MLRTQTPAQR EESIQAELRS ANLRGTATLA TNDLSVADGP LVITMKGTLE SLVVPGAAAS IPALTSLAGG FAADTRYWLG ERQRTQPFVC HNLALHERAR IELPANFHVL DMPEAKRTQD RFVDFQSQYT FDPLSNVVTM SREGATHFDS DVCTPQDFEQ MRPAIEAIGR DVRAEVIVRS TLVESSSVAA QAP
|
| |