| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0358 |
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| Symbol | |
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| ID | 6283548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 386553 |
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| End bp | 388082 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642619921 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001894007 |
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| Protein GI | 187922365 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC CACGGTCCTG TCGCCGTGTT GTCGCGGCGC CGCTGCGATG TGTCTCGCTG
CTCGCGTCCG CTCTGGCATT AGCGAGCGCA TGTGCACTCA CCGCATGCAC GCTCGGGCCG
GACTACGTGA AGCCGACCGC CACTACCGCG GCAACCTACA AGGAACTCGA CGGCACCGGC
TGGAAACCCG CCCAACCCGC CGACACGCTC ACACGCGGCG CGTGGTGGAG CGTCTACGCA
GACCCGTCGC TTGACGCACT CGAACAACAG GTCGCGAGCG CGAACCAGAA CGTGCAGGCC
GCCGAAGCGC GCTTTCGCGC CGCCCGTGCA ACCGTGGCGC AATATCGGTC GAGCTTCTTC
CCGGTCGTCA GCGCGAATGG CGCCTATTCG CGCGCGCGGT CGTCGGAGAA CGTGCTGCAC
AAATCGACCG CTGGCCTCAC GCTGAACGAC TACCTCGTGC AAGCCGACGC GTCGTGGGAA
CCCGACCTGT GGGGGCGCGT GTCGCGCAGC GTCGAAGGCG CGAAAGCCGA AGCGCAGGCG
AGCGCCGCCG ATGCCCAGGC CGCGCTCCTG TCGATGCAGG CTGAACTCGC CACCGACTAC
TTCGAGCTGC GCGGACTCGA TCAGGAGCGC CAACTGCTCG ACGACACGAT CGAGGCCTAC
AAGCAAGCAC TCGATCTCAC GCAACATCGC TACACCGGCG GCATCGCCAC CGATGCGGAT
GTCGCGCAGG CGCAGACGCA GCTAAAGACC ACCCAGGCGC AAGCACTCGA CCTCGGCGTG
CAGCGCGCGC AGCTCGAACA CGCGATCGCG ATCCTGATCG GCCAGTCGCC TTCAACGTTT
TCGCTGCCGG TTGCGCCGCT CACCGCAGTG CCCATCGTGG CGGCGGCAGG CGTGCCGTCC
GCGCTGCTCG AACGCCGCCC GGACATCGCG GCGGCGGAAC GGCACGTTGC CGATATGAAC
GCGCAGATCG GCGTGGCGAC GGCGGCGTTT TTTCCGAACC TCATTCTGTC GGTGACGGGT
GGCCTCGAAG CCACCAACTA CAGTCAATGG TTGCTGGCGC CGAGCCGGCT GTGGTCGCTT
GGGCCGACGT TGGCGGGCAC GCTGCTCGAC TTCGGCGGAC GCGCTTCGGT GAAGGAACAG
GCCCGTGCGC ATTACGACGA GAGCGTCGCG CAATACCGGC AGACGGTGTT GAGCGCTTTC
GGCCAGGTTG AAGACAATCT CGCTGCGCTG CGCGTGCTCG AACAGGAAGC GACCGCGCAG
GACGACGCGG TGGCCGCCGC GCAACGAGCG CTCGCAGTGG TATCGAATCG CTATAAGAAC
GGCGCCATCA CCTATCTCGA CGTGGTGGTC GCGCAAACCA CCGCGCTCAC CAACGAGCGC
AACGCCGTGT CGATCGCGCG GCGGCGGATG GCCGCGAGCG TGGCGTTGAT CAAGGCACTG
GGCGGCGGCT GGGACGCATC CGCGCTGCCG ACGGACGAGC AGATCGTGCA TCCGTCCGCG
CCCGCGAGCG ATGCCGCCGC GCACGGGTAG
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| Protein sequence | MNTPRSCRRV VAAPLRCVSL LASALALASA CALTACTLGP DYVKPTATTA ATYKELDGTG
WKPAQPADTL TRGAWWSVYA DPSLDALEQQ VASANQNVQA AEARFRAARA TVAQYRSSFF
PVVSANGAYS RARSSENVLH KSTAGLTLND YLVQADASWE PDLWGRVSRS VEGAKAEAQA
SAADAQAALL SMQAELATDY FELRGLDQER QLLDDTIEAY KQALDLTQHR YTGGIATDAD
VAQAQTQLKT TQAQALDLGV QRAQLEHAIA ILIGQSPSTF SLPVAPLTAV PIVAAAGVPS
ALLERRPDIA AAERHVADMN AQIGVATAAF FPNLILSVTG GLEATNYSQW LLAPSRLWSL
GPTLAGTLLD FGGRASVKEQ ARAHYDESVA QYRQTVLSAF GQVEDNLAAL RVLEQEATAQ
DDAVAAAQRA LAVVSNRYKN GAITYLDVVV AQTTALTNER NAVSIARRRM AASVALIKAL
GGGWDASALP TDEQIVHPSA PASDAAAHG
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