Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0353 |
Symbol | |
ID | 6283410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 382269 |
End bp | 383030 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642619916 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_001894002 |
Protein GI | 187922360 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.693124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTTC ATTCCAAGAA AGAGCAGATT CAGACGTTGC GGGAGCAGGG TTTTGTCGTC GTGCCCGGAT TGGTGTCGCC CGAGCGTTGC GATGAGTTCA AGCAGATCGC GCAGCGTCAG TTGCAGGAAG CGGCCGCGCC GATCGAGTTC GAAGCGGATC TGCAGTATCC CGGCGCGCCG ACCTCCAAAC AGGCGCCCGG CGGTCATACA GTGCGGCGGC TGCTGGATGC GTATGGGCGT CATCCGAGAT TCGCGCAATG GGCGACCGCG CCGGAAATTC GCGGCTGGAT GGAACTGTAT TTCGGCGAGG AGCCGCGTCT GTCACGCGCG CACCATAACT GCATGATGAC CAAGCATCCG GCGTATGGCA GCTTGACCGG CTGGCATCGC GACGTGCGGT ATTGGTCGTT CGAGCGGGAC GATCTGGTGT CGGTGTGGCT CGCGGTCGGC GCGGAGACGG TGGATAACGG CGCGCTGTGG CTCGTGCCGA AGTCGCACAA CGCCCCGTTC ACTTCCGACC GGTTCGATCA GGCCAAATTT TTCCGTTCGG ATCTGGAAGA GAATCAGGAG TGGATTCGCA CCGCGGTGTC GCCTGATCTC AAGCCCGGCG ACGTGGTGTT TTTCCACTGC AACACGCTCC ATTCGGCCGG CAAGAACATT ACCGATCAGG TGAAGTTTTC GCTGGTGTAC ACGTATCACG GCGCGAGCAA TGTGCCGTTG CCGGGAACCC GTTCGGCTGC GAAGCCCGAA GTGGCGTTTT AG
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Protein sequence | MSLHSKKEQI QTLREQGFVV VPGLVSPERC DEFKQIAQRQ LQEAAAPIEF EADLQYPGAP TSKQAPGGHT VRRLLDAYGR HPRFAQWATA PEIRGWMELY FGEEPRLSRA HHNCMMTKHP AYGSLTGWHR DVRYWSFERD DLVSVWLAVG AETVDNGALW LVPKSHNAPF TSDRFDQAKF FRSDLEENQE WIRTAVSPDL KPGDVVFFHC NTLHSAGKNI TDQVKFSLVY TYHGASNVPL PGTRSAAKPE VAF
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