Gene Bphyt_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0348 
Symbol 
ID6281341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp377135 
End bp377857 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID642619911 
Productprotein of unknown function DUF484 
Protein accessionYP_001893997 
Protein GI187922355 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.682729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC GCGAAGTCGC CGAATATCTG CTTGCCAATC CTGAATTCTT CGCCGAACAC 
GCGGAAATGC TCGCGACGGT CCGCCTCGCG AACCCGCACG GCAAAGCCGC GGTGTCGCTG
CAGGAACGGC AGATGGAAAT GCTGCGCGAC AAGAACAAGC ACCTCGAACG CCGCCTCGCC
GAACTCTTGC GCTACGGCCA CGAGAACGAC AGCATCGCGT CGAAATTCAA CCGCTGGACG
ATTCGCGTGA TGGCCGAGCG CGATCCGTAT GCGCTGCCGC GCACGATCGC CACCGGTTTG
CGCGACATCT TCGACGTGCC GCAAGCCGCG CTGCGCGTGT GGGATGTGGC CGAGCCGTAC
GCTCAGGCCG ACTTCGCGCG CCATGTCGGC GAAGAAGTGC GCATTTTCGC CAACAGCCTG
ACCACGCCGT ATTGCGGTGC GAATACCGGC TTCGAGGCCG CGCAGTGGCT GGTGCCCTCC
GTGAGCGCGG TGAGCGACGA GGGCTCGACT GGCCACGCGG CGTCCGAGTC GGCGCACGCT
ACCGAATCGA TCGCGCTGCT CGCGCTGCGC GATCCGGAAG CAAAGGAAGA AGCGCCCACC
TTCGGCCTGC TGGTGATGGG TTCGGCCGAT TCGCGCCGCT TCCACGACGG CATGGCCACT
GATTTCCTGA CGCAGATCGG CGCGCTGGCC AGCGCGGCGC TGAGCCGTCT GCTGCCGCGC
TGA
 
Protein sequence
MNDREVAEYL LANPEFFAEH AEMLATVRLA NPHGKAAVSL QERQMEMLRD KNKHLERRLA 
ELLRYGHEND SIASKFNRWT IRVMAERDPY ALPRTIATGL RDIFDVPQAA LRVWDVAEPY
AQADFARHVG EEVRIFANSL TTPYCGANTG FEAAQWLVPS VSAVSDEGST GHAASESAHA
TESIALLALR DPEAKEEAPT FGLLVMGSAD SRRFHDGMAT DFLTQIGALA SAALSRLLPR