Gene Bphyt_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0340 
Symbol 
ID6282579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp368130 
End bp369440 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content61% 
IMG OID642619903 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001893989 
Protein GI187922347 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAA TCACCAACAC TGGCCGCGTC AATCTCGGGC ATCTGTTCTG GCTGCGCAGT 
CTCGCGATCA TTGGCCAGTT GATGACGATT GCCTTCGTGC AGATCTTCAT CGGCGTGCAC
TTGCCGTTGC CCGCCATGCT GTTGGTGATC GCGCTCGAAG TGATCTTCAA CGCAATCACG
TGGTGGCGCG TCTCGCAGCA GCGTCCCGAA TCCAACATGG AGTTGTTCGG CCAGATATGG
GTCGATCTGG GCGCGTTGTC CGCGCTGCTG TTTCTTTCCG GCGGCACCAC CAATCCATTC
GTTTCGCTCT ATCTGCCCTC GCTTGCCATC GCCGCGGCCG TGCTGCCGTG GCATCTGATG
GCGTGGCTCG CAGCGTTCGC CGTGGCCTGC TACGCGGTGC TCGGTTTCGA TTCTGTACCG
CTGAATCTCG ACAATCCGGC GAACCTGTTC GACTACTACC GCGCGGGCAT GTGGGTGAAC
TTCATGGTCA GCGTCGGCCT CATTGCATGG TTCGTTGCGC GCATGTCGAG GGCATTGCGG
CTACGTGACG CAGCGCTCGG AGACGCGCAG CAGCGCTTGC TTCACGACGA ACGCGCGGTT
GCTTTGGGTG TGCAGGCGGC TACCGTGGCA CACGAAATCG GTACGCCGTT GTCTACAATT
GCCATGTTGT CCGAAGAATT GCGAGATGCA GCGCGTTCCG ATAAGGGACT TGCGCCTTAT
AGCGCCGATC TCGAATTGCT CGAACAGCAA ATGACACTGT GTACGTCGGC GCTTGCGCGC
TTGCGCAGCC GCGCGTCGAT AACCACTAAC CGGCAGCAGG TCGGCGAGTG GCTCGAATCG
TTTGCCGAGC AGTGGCGCTT GCGTCATCCG CATGTGAAAT TCGAGCGGGT TGGCGTGCCG
CCGGCGGATG TCAGTCTTGA CGATACGGTG GCCGTGAGTC AGATTCTCAC GATTTTGCTC
GACAACGCCG CGCGTGCAAG CCGCGATCAC GTGACGCTGT CCTGCGCGCT AGCGGCGCGC
GGCGACCAGA TCGTCTTCGA AGTATGTGAT GCAGGCCCGG GCATTCCGGC CACGTTGCGC
GGCTCGCTCG GAGCGATGCC GGTCGAGAGT ACGCAAGGTG GGCACGGTGT CGGCCTCTAT
CTGGCTTTTT CGGCGGCGGC GCGCCTGAAT GGATCAATCG AACTGACCGA TGTCAGCACG
ATCAAGCCGC GCGGCACGCG CGCGGTCCTT AAGCTGCCGC TCGCCGGACG CAAATTTTCT
GGCAAAGGCC GTCAAGGCGC TGCGCCATCC AACACGGAGA AACAGGCATG A
 
Protein sequence
MQRITNTGRV NLGHLFWLRS LAIIGQLMTI AFVQIFIGVH LPLPAMLLVI ALEVIFNAIT 
WWRVSQQRPE SNMELFGQIW VDLGALSALL FLSGGTTNPF VSLYLPSLAI AAAVLPWHLM
AWLAAFAVAC YAVLGFDSVP LNLDNPANLF DYYRAGMWVN FMVSVGLIAW FVARMSRALR
LRDAALGDAQ QRLLHDERAV ALGVQAATVA HEIGTPLSTI AMLSEELRDA ARSDKGLAPY
SADLELLEQQ MTLCTSALAR LRSRASITTN RQQVGEWLES FAEQWRLRHP HVKFERVGVP
PADVSLDDTV AVSQILTILL DNAARASRDH VTLSCALAAR GDQIVFEVCD AGPGIPATLR
GSLGAMPVES TQGGHGVGLY LAFSAAARLN GSIELTDVST IKPRGTRAVL KLPLAGRKFS
GKGRQGAAPS NTEKQA