Gene Bphyt_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0336 
SymbolslmA 
ID6283177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp363108 
End bp363791 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID642619899 
Productnucleoid occlusion protein 
Protein accessionYP_001893985 
Protein GI187922343 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGA TCGACAAGCC TGACGAAGTC TTAACCGAAC ACGAACCGAA CCCCACGCTC 
GCCGCCCCGC GCGCGCAGCG CCTGAAGCCG GGCGAGCGCC GCGTGCACAT TCTCCAGACG
CTCGCCGCGA TGCTGGAGGC GCCCAAGAGC GAAAAGATCA CCACCGCGGC GCTGGCCGCC
CGGCTCGGCG TATCGGAAGC CGCGCTGTAC CGTCATTTCG CCAGCAAGGC ACAAATGTTC
GAAGGGCTGA TCGAGTTCAT CGAGCAAAGC ATCTTCGGGC TGATCAACCA GATCGCCGGC
AAGGAAAGCA ACGGCGTGCT GCAGGCGCGC TCGATTGCGT TGATGCTGCT CAACTTCCCC
GCGAAGAACC CCGGCATGAC GCGCGTGCTG ACGTGCGAGG CGCTGGTCGG CGAGCATGAA
CGGCTGACCG AGCGCGTCAA TCAGATGCTG GAGCGCGTCG AGGCGTCGTT GAAGCAATGT
CTGCGGCTTG CGCAAATGGA GGCGAACAGC ACTGCGAATT CTGGTGAGAA CGACGTCCCG
CTGCCCGCCG GCTACGATCC CGCGATTCGG GCGAGTCTGC TGCTGAGCTA TATCATCGGC
CGCTGGCACC GCTATGTGCG CAGCGGCTTC GCGCGCTCGC CCGCCGAACA CGCCGACGCG
CAACTGCTCC TGATTCTTCA GTAG
 
Protein sequence
MQPIDKPDEV LTEHEPNPTL AAPRAQRLKP GERRVHILQT LAAMLEAPKS EKITTAALAA 
RLGVSEAALY RHFASKAQMF EGLIEFIEQS IFGLINQIAG KESNGVLQAR SIALMLLNFP
AKNPGMTRVL TCEALVGEHE RLTERVNQML ERVEASLKQC LRLAQMEANS TANSGENDVP
LPAGYDPAIR ASLLLSYIIG RWHRYVRSGF ARSPAEHADA QLLLILQ