Gene Bphyt_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0325 
Symbol 
ID6281552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp350263 
End bp351372 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID642619888 
Productrod shape-determining protein MreC 
Protein accessionYP_001893974 
Protein GI187922332 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACA GTCCGCCGCC CCTGTTCAAG CAAGGACCGT CCGCCCTCGC ACGACTGGTA 
TTTTTTGTCT TGCTGGCGAT CGCCCTTCTG ATCTCCGACG CACGCTTCAA AACGCTCGAA
ATCGTGCGTG GCGTGCTCGG CGCGGGTCTT TATCCGTTGC AACGCGCCGC CCTCGTGCCG
CGCGACATGT TCGTGGGCGC CGCCGACCTG GCCGTGACCA GCGCCACGCT ACGCAGCGAA
AACGACAAAC TGCGCACCAA AGATCTGCAG CTTTCGCAGC AAGCCAATAC GGCCGCTGAA
TTGGCGGCCG AGAACGCGCA CTTGCGCGCG CTGCTGCAAC TGTCGCAGCG CTCCACCACG
GAATCGCTGC CCGCCGAGAT CCAGTACGAC ACGCGCGATC CCTTCACGCA GAAGGTCGTG
ATCGGCCGCG GTGCGCAGCA AGGCATCCAG AACGGTTCGC CGGTCGTCAA TGAAGACGGC
GTGATCGGCC AGGTCACGCG TGTGTTCCCG CTGCAAGCCG AAGTCACGCT GCTCACGGAC
AAGGACCAGG CCGTGCCGGT GCAGATCGTG CGCACCGGCC TGCGCAGCGT GATTTACGGC
ACGCCGAAGG GCGACACGCT GGATCTGCGC TTCGTGCCGA TCAGCGCCGA TATTCAGACC
GGCGACGAAC TCGTCACCAG CGGCCTGGAC GGTGTGTACC CGCCGGGTCT GCCGGTTGCC
AAGGTGGTGC GGGTCGACAA GCAGGCCGAT ACCGCGTTCG CGCGCGTAAT CTGCCTGCCC
ATCGCGCCGG TGCGCGGCGC ACGTCAGTTG CTGGTGCTGC ATTACGTGAA CAATGTGCCG
CCGCGTCCCG CTGAGGAACC CGACGCAGCC ACGGCCGCGA AGGACGCAAA GGCGAAAAAG
GGCGCCAAAC CGGCTGACGG CAAGGCCGCA GCGGATAAAT CCGCGCCGAA ATCCGGCGAA
AAACTTGCAG CCGAGAAACC CGCGACCGCC AAGCCCGCCG ACAAAACGCC GGCCAAACCG
GCCGCCGCGG AGAAAAAGTC CGCTTCCGAA AAGAAACCGG CCGCTGAGAA GAACGCAAAG
CCGCCAGCCA AGCCAGGGGC CCAGCCATGA
 
Protein sequence
MEYSPPPLFK QGPSALARLV FFVLLAIALL ISDARFKTLE IVRGVLGAGL YPLQRAALVP 
RDMFVGAADL AVTSATLRSE NDKLRTKDLQ LSQQANTAAE LAAENAHLRA LLQLSQRSTT
ESLPAEIQYD TRDPFTQKVV IGRGAQQGIQ NGSPVVNEDG VIGQVTRVFP LQAEVTLLTD
KDQAVPVQIV RTGLRSVIYG TPKGDTLDLR FVPISADIQT GDELVTSGLD GVYPPGLPVA
KVVRVDKQAD TAFARVICLP IAPVRGARQL LVLHYVNNVP PRPAEEPDAA TAAKDAKAKK
GAKPADGKAA ADKSAPKSGE KLAAEKPATA KPADKTPAKP AAAEKKSASE KKPAAEKNAK
PPAKPGAQP