| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0321 |
|---|
| Symbol | |
|---|
| ID | 6281548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 345325 |
|---|
| End bp | 346029 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642619884 |
|---|
| Product | Sel1 domain protein repeat-containing protein |
|---|
| Protein accession | YP_001893970 |
|---|
| Protein GI | 187922328 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGGA TGGTGCAGTG CGTCGTGGTG CGTCTGGCAG TTACAGCGGC ATTGATGGCA
AATGCGGCGG CCTATGCGCA AGACAGCCGG GTCGCGAAGT CGAATGATCC GGAGACGCAA
ACCGCGGTCG CCGACTACAA CGCCGGCAAT CTGGGCGCGG CGCTCGCCGA GTTTCGCAAG
GCCGCCGAGC GCGGCAGCCG GCTCGCCGAG TTCAACTACG CGATGATGCT GCTCAATGGC
GAAGGCGCGC CCGCGAATGT CGATGAAGGC AAGAAATGGC TGCGCAAAGC CGCTGACGCC
AATATGTCGC ACGCGCAATA CGTGTACGGC AAGATGTACG ACGATGGCGA GTTCGTCGGG
CGCGATCCGG TCGAGGCGCA CCGCTGGTTC CTGAAGGCGG CGCAGCAAGG TCACGTGCAG
GCGGAGTTGG CGCTGGCCAA TCAATTCCTC GATGGACGCG GCACCGAGCG CGACAACAAG
CAGGCGTTTA TCTGGTACAA GAAGGCGGCG CAGGGCGGCG ACATGACCGC GCAATACGTG
GCCGGCTCGT TCTACGAACG CGGTGGCGAC GGCGTGGAGA AGAATCTCAA CGTGGCGCGC
GCTTATTACG CGGCGGCGGC GGCGCAGGGC GATCCGGCGG CGCGGCTCAA GTATCAGCAG
CTCAGCGCGC AGTTGCGGGA TCAGAAGGAA GTGAAGCCGC AGTAA
|
|---|
| Protein sequence | MKGMVQCVVV RLAVTAALMA NAAAYAQDSR VAKSNDPETQ TAVADYNAGN LGAALAEFRK
AAERGSRLAE FNYAMMLLNG EGAPANVDEG KKWLRKAADA NMSHAQYVYG KMYDDGEFVG
RDPVEAHRWF LKAAQQGHVQ AELALANQFL DGRGTERDNK QAFIWYKKAA QGGDMTAQYV
AGSFYERGGD GVEKNLNVAR AYYAAAAAQG DPAARLKYQQ LSAQLRDQKE VKPQ
|
|---|
| |