Gene Bphyt_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0305 
Symbol 
ID6284008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp327055 
End bp328158 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID642619867 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001893954 
Protein GI187922312 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCATT TGCAGTCGAT GCGAGTTTTC GTCAAAGTGG CGGATCTCGG CAGTTTTGCC 
CGCGCTGCGA GCGCGATGGA TATTTCCAAC GCAGTTGCCA CCCGTCACGT TGCGGACCTC
GAAGGCCGTC TAGGTACGCG GCTGCTCAAT CGCACTACCC GCAGCTTGTC TCTGACCGAA
TCAGGTCAGG TTTATCTCGA GCGCGCGCGC CAGATTCTCG ACGAACTGGA AGACGTCGAG
CAGATGGTGG TCGCGCGCAA TCACGAACCC GTCGGCACGT TGCGAATCGT CGCGCCGGTC
GTGTTCGGGT TGCACAATCT CGCGCCCGTG CTCCAGACGT ACGCGGAGCG CTATCCGAAA
GTCATTCCCG ATGTCACGCT GGTCGACCGT CAGGTGGATC TGGTCGAAGA AGGCTTCGAC
GTGGGCGTGG TGATTGCGCG GCAAATGCGC AGCGCAAGTA TCGTCACGCG GCGTCTCACC
ACGGGCTGCA TGACGGTGTG CGCCACGCCG GCTTATCTGG AGAAGCACGG CATGCCCACG
CGTCCGGAGC ATTTGCTCGA GCATCCGTGT TTGAGCCTGC CCTCCGAATA TTGGGGCGAT
GAGCGTGTGT TCACCGGCCC GGAAGGCGAA GTGCGCGTGC GTCCGTCCAA CGTGATCGTC
GCGAACAATA CGGAGATGCT GCGTCAGTTT GCGTTGCTCG GCATGGGTAT CGCGATCCTG
CCGAGTTATC TGATCGGCCG CGATATGACG CGCGGCAGGC TCGTGCGTTT GCTCGGCGAC
TACCGGCTGC CGCAAGTCGA GATCAACATC GCGTATCCGA GCCGCCGTCA CTTGCCGGCG
AAGGTGCGCA CGTTCATCGA CCATCTGGTT GAGCATTTCA GCCAGACGCC GAATAGCATG
CTCGGTGAAC AGTGGATCAA GGAGGACGGC TTGGGCCGGG CCGCCACGAC GACGGCGCTC
GATTCCGCGG ATCCCATGCC GCCGGAAGCG TTCGACGGCG CTGAGCCGCT CTCGCGGCTG
CTGGACAGTG AGTTATCACC GCTGCCTAAG ACGTTGGCCA AGACGACGCC TCGCACCCGG
CCTACGGCTT TATCTCCGTT GTAA
 
Protein sequence
MDHLQSMRVF VKVADLGSFA RAASAMDISN AVATRHVADL EGRLGTRLLN RTTRSLSLTE 
SGQVYLERAR QILDELEDVE QMVVARNHEP VGTLRIVAPV VFGLHNLAPV LQTYAERYPK
VIPDVTLVDR QVDLVEEGFD VGVVIARQMR SASIVTRRLT TGCMTVCATP AYLEKHGMPT
RPEHLLEHPC LSLPSEYWGD ERVFTGPEGE VRVRPSNVIV ANNTEMLRQF ALLGMGIAIL
PSYLIGRDMT RGRLVRLLGD YRLPQVEINI AYPSRRHLPA KVRTFIDHLV EHFSQTPNSM
LGEQWIKEDG LGRAATTTAL DSADPMPPEA FDGAEPLSRL LDSELSPLPK TLAKTTPRTR
PTALSPL