Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0279 |
Symbol | |
ID | 6281454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 297996 |
End bp | 299387 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642619841 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001893930 |
Protein GI | 187922288 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTTTG GGCTCGTGAA TAATGAAAAT GAACATCAAA AGCGGGTATT AACGGCGACC AGTCTCAGCT ACGTCGTCGT CATATTAGAT ACATCCATTG TCAACGTCGC ATTGGAGCCC GTTGCTGCGA GTCTGGGCTC GGATATCACG GGTCTTCAAT GGGTGGTCAA TGCCTATACG CTCACATTTG CGAGCCTGTT GCTGAGTAGC GGAGTATTGG GCGACCGGAT CGGTGCAAAA TCGGTCTATC TGGCCGGACT GCTGATTTTC GCTTGCGCAT CGGCATTATG CGGATTCGCA CCGGACTTGC AGATTCTTGT CGCTGCACGG ATTTTACAGG GAATAGGTGC GGCATTACTG GTGCCGTGTT CGCTGACACT CATCAATAGT GCGTTTCCGG TTGCGCAGCA GCGAGCCGGT GCGATCGGCG TGTGGGCCGG ATGCGGCGGC GTCGCGATGG CGGCAGGGCC GCTCGTTGGC GGCTTGCTGA TTCATCTGTT GGGCTGGCGG AGCATCTTCC TGGTGAACGT GCCGATTGCG CTAATCGGCG TCTGGCTCAC CACGCGAATC GAGTCCGCAC GTCCTGCCGT GTCCGACCGG CCGTTGGACC TGGCCGGGCA GGTGCTCGCC ATCGTCGCGC TGGGTGCGTC GGTGGCAGTG CTGATCGAAG GCGCGAAGCT GGGGTGGCAT GTGCCGGTCA TCCGCGCCGG CGTCGCGACC GCGATCGTTG CATGGATTGC ATTCGCGCTG GTTGAATCCA GGCGCCGACA ACCCATGCTG CCCCTGTACT TCTTTCGGCA TCCGACATTT TCCGCATCGG CGTTTGCGTC GATGATCTCG GGTCTGGTGT TCTACGGATT GTTCTTTCTG CTGAGCCTAT ATTTTCAGTC CGCGCGCGGT TGGCCGCCGT TGCGGACCGG TCTCGCGTTT TTGCCCTTGA CGGTGATGGT GACAGTCGGC AGTTTCGCTT CAGGCGCTTT GAATAGGGCT TATGGTGCAC ACAAGCTCGT GTGCGGCGGC TTTCTGCTCT ATGCACTGGG CTTCGTCGGG CTGCTTGCAT TGGCCGAAGA TGCCCCCTAT TGGCGGATTG CACTCTGTTT CCCGGCCGTC GGCTTCGGTG CCGGCGTGAT TACACCAGCG GCGACCGCCG CATTGATGGC TGCGGTGGAT AAGGCGCGCG CGGGCGTTGC AGCAGGCGTT CTCAATGCAA GCAGGCAAAC GGGGTCCGCA TTCGGGGTTG CGATCTTCGG CGCGCTGATG AGCGCCATCC AGCCACTGGA TAGCGGGGTT CGTGTCGCGG TCTATCTGGC TATCGGCCTG TCACTGCTCG CAGCGCTTCT ATGGAGTCTC GCCTCGGTAC TGGCCACCCG TTACGCGCGT GAGACTGCGT AG
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Protein sequence | MGFGLVNNEN EHQKRVLTAT SLSYVVVILD TSIVNVALEP VAASLGSDIT GLQWVVNAYT LTFASLLLSS GVLGDRIGAK SVYLAGLLIF ACASALCGFA PDLQILVAAR ILQGIGAALL VPCSLTLINS AFPVAQQRAG AIGVWAGCGG VAMAAGPLVG GLLIHLLGWR SIFLVNVPIA LIGVWLTTRI ESARPAVSDR PLDLAGQVLA IVALGASVAV LIEGAKLGWH VPVIRAGVAT AIVAWIAFAL VESRRRQPML PLYFFRHPTF SASAFASMIS GLVFYGLFFL LSLYFQSARG WPPLRTGLAF LPLTVMVTVG SFASGALNRA YGAHKLVCGG FLLYALGFVG LLALAEDAPY WRIALCFPAV GFGAGVITPA ATAALMAAVD KARAGVAAGV LNASRQTGSA FGVAIFGALM SAIQPLDSGV RVAVYLAIGL SLLAALLWSL ASVLATRYAR ETA
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