Gene Bphyt_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0271 
Symbol 
ID6281984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp288332 
End bp289408 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content60% 
IMG OID642619833 
ProductGlycine hydroxymethyltransferase 
Protein accessionYP_001893922 
Protein GI187922280 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCA TCGACGAACT GGAGTCGCTA TGCGTCGAAC TTCTCAAGAA GGCGTTTCGC 
GTGCGCTATG CTGACCACCG GTTGATGGGT GGCATGGCGG CCACGCTTGT CGCCTACACC
GCATTGACTC AACCTGGAGA TAGGGTGATG ACCGCACCAC TGCAGATGGG CGGCGACACC
AGCAATCGGA CCAACGGTCC GCCGGGCGTG CGCGGGACGA GAGTGATCGA CATTCCTTAT
TCGGTGAAGG ATGGGAGCAT CAACCTCGAC GAGTTTGCGA CGATAGCGCG TAAGGAGCGA
CCCGCGGTAA CCGGGCTCGG GATGACGCTC ACGCTGTTTC CACTGCCGAT CCGGGAGATC
AAGGCCATCG TATCTGAATG GGGCGGGCTC GTATATTTCG ACGGCGCGCA CCAGCTCGGC
CTGATCTCGG CTGGGCTGTT CCAGGATCCA CTCGGCGAAG GTGCCGATGT CATGACGGGT
TCATCGGGCA AGACGTTTAG TGGTCCCCAG GGTGGCATCA TCTGCTGGAA TACCGACCGC
CTCGCTGACA CGATTGCCGA AACGATTTTT CCTGTTCTTA CGGGTAGCCA CCAGATCAAT
CGCGTCGCTG CCCTCGCTGT GGCGGCGTCG GAAATGCTCG AGTACGGACC AGTTTACATG
CGTCAGGTTG TCGCGAACGC CCAGGCGCTG GCGGAGTTCC TTCACGACCG GGGTATTAAC
GTTCTCTATG CGGAGCGCGG TTATACGCAG ACACACCAGA TCGTTGTCGA TTCCAGACCT
GCTGGGAGCG GCCGCACGGC CGTACGCCGA CTTGAGGCTG CAAACATTAT CTGTAACGAA
ATGCCTTTGC CCTGGGACTC CGTCGAGACG GGCGGGGTTG AGACCGGGAT CAGGCTGGGC
ACCGTGGAAG TCACCCGTCG GGGGATGGGG GTAGCCGAGA TGGAATGGAT AGCCGAACGG
ATCGCGAAGG TGCTGCATGG TAGCGAGGCA ACAGCAATCG CACCGGAGGT CGCCGATTTC
CTGGGTCGGT TTGACACGAT CTACTACTGC CACGAACATG GACTGCCGCC CCGTTGA
 
Protein sequence
MRFIDELESL CVELLKKAFR VRYADHRLMG GMAATLVAYT ALTQPGDRVM TAPLQMGGDT 
SNRTNGPPGV RGTRVIDIPY SVKDGSINLD EFATIARKER PAVTGLGMTL TLFPLPIREI
KAIVSEWGGL VYFDGAHQLG LISAGLFQDP LGEGADVMTG SSGKTFSGPQ GGIICWNTDR
LADTIAETIF PVLTGSHQIN RVAALAVAAS EMLEYGPVYM RQVVANAQAL AEFLHDRGIN
VLYAERGYTQ THQIVVDSRP AGSGRTAVRR LEAANIICNE MPLPWDSVET GGVETGIRLG
TVEVTRRGMG VAEMEWIAER IAKVLHGSEA TAIAPEVADF LGRFDTIYYC HEHGLPPR