| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0248 |
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| Symbol | |
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| ID | 6283680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 264023 |
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| End bp | 265906 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642619810 |
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| Product | integrase family protein |
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| Protein accession | YP_001893899 |
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| Protein GI | 187922257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA CGCTGATCAC GCCGATCGCA GAGCGCCCCG ACTGGTATCG GATCGAGGAT
GATACGGTCG TCACGCGCGA CAAGGCTGGG AATGCCGTTT CGCTGTTTGG TGACGACGCC
TGGGACATCG GCGCATACGC GATTGGGCCG CGCAGCACCG GCCTCCATTT TAGGGGCCAC
CTGCCTGACG GCGTGACCCG TGCTCTTTCA GAGGCGACCA CGCGTCAGTG GAAGCAGATC
ATGTACTTTC TGATGCATGA AGCAACCGAT ATGGTACCGG CGTCCAGTAC GCTTCAGGCT
CGTTCGGTTT ATCTGAGGGA ATTCGCATTC TTTGCCGCCG AACGGCAGCT TACGCTCTAC
GAGGGGCTGT CCAATGTCCC CATTGTTCTG GACTATGTGG CACAAGCGGG GATGGAAAGG
AAGGCCCAAC GCCTTCATTC AATTCTGGTG CAGCTTCACC GTCTGGGCGT CGGGACCACC
GGACTGTGTG TGCCGCTGGC CCAACTACAT AAGCCTCTGC TCGATCGCTT CGCGCAACGC
GCTGAATACG CACAATACCC TGTCATCCCG ACGCGGATCT ATCAGCACTT CCTGTCGACC
TGTGAGCATG ACCTCGGCGT CGCTGAGGAC GTCGCTGACA TCCTGTCGGA TTACCTCGCA
CGCGTGTACG CCGGCGAGAA TCCAGACGTC TCTGCAGCGG TCGCAACGAA TGCTGTGCAC
TTCGGGTGCA AAGACTCCCC TTACGTCGTG TCGTCGCTTG TGGCGTCGAT CCGCGCGCTA
TGCCAGCTTG TCATCCTGGC ATTCACCGGC ATGCGCGCGA GGGAAGCGGA GAACCTGCCG
TACGACTGCC TGAGCGAGAC CCGTCTGGAT GGCGTGACGC ACTACACCAT CGAGGGCGTC
ACAACCAAGC TGTCGGGTGG TCGTCCCAGG CGCGCGCGCT GGGTGACCAG CCCGCTCGCC
GCTCGTGCCG TCCGGCTTGC GCAGCGGCTG TCGGGCGAGG CTCACCGTGC GCACGGCGCA
CCGAGCTACG CCGAATCAAC GGACGGGTCA CACCTGCTGT TCTGCCGGAT GGGTCTGCGT
TATGGGTACG TGGCAAACCG TGGGGCGAGT ACCCTGCATC TCGATGTCGA AGCGTTTCGT
GAGCGCGTCT TCCCGACGAT CACGGTCGAG GACATTGCCG AACTGAAGCG TGTCGACATG
CACCGCGCGT GGGAAGACGA ACCGAAGTAC GCGCCCGGGC AGCAGTGGCC GTTCACGCGC
CACCAGCTTC GCCGGACCCT GGCCCTCTAC GCGCATCGGA GCGGACTCGT GACACTGCCG
ACGCTCAAGC GTCAGTTGCA GCACATCACG CAGGAAATGA GCATGTACTA CGCCCGCGGC
TCGGCGTTCG CGAAGGGCTT CATCGACATC GACAGGACCC ACTTCGCGAA GGAATGGGTT
GAGACACAGA GCCTGTCCGA ATACCTTGCA TACGCCCAGC AGGTGCTGTT CTCCGACGAG
CGGCTGTTCG GCGGGCACGC AGCGTGGACG CAGAGCCGTG CCGTGCAGGC CTCGCCCGTG
TCGGTTTATT CGCGCGACCA GACGGTGAGG ATGTTCAGGA AGGGCGAGCT GGCGTACCGC
GAGACGGTGC TGGGCGGCTG TGCCAGCATC GAACCGTGCA AGTCGACACC GCTCGACTGG
ATGCGTCTGG ATTGTCTTGA GTCGAACTGC CGTAACCTCG TGGTCGTGCC GTCGAAGCTT
CAGCGCGTGA TCAAGGCGCA GCAGGTTACG GTCGGGAAGC TGCGCGCTGT CGACGATGCG
AGCGTCGAAT ATCGTATCGA GGTCCGGACG CTGCAACGAC TGCTTGATGC GCAGGAGAGA
CTGATCAAAC CGGAGGTAAC ATGA
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| Protein sequence | MNNTLITPIA ERPDWYRIED DTVVTRDKAG NAVSLFGDDA WDIGAYAIGP RSTGLHFRGH
LPDGVTRALS EATTRQWKQI MYFLMHEATD MVPASSTLQA RSVYLREFAF FAAERQLTLY
EGLSNVPIVL DYVAQAGMER KAQRLHSILV QLHRLGVGTT GLCVPLAQLH KPLLDRFAQR
AEYAQYPVIP TRIYQHFLST CEHDLGVAED VADILSDYLA RVYAGENPDV SAAVATNAVH
FGCKDSPYVV SSLVASIRAL CQLVILAFTG MRAREAENLP YDCLSETRLD GVTHYTIEGV
TTKLSGGRPR RARWVTSPLA ARAVRLAQRL SGEAHRAHGA PSYAESTDGS HLLFCRMGLR
YGYVANRGAS TLHLDVEAFR ERVFPTITVE DIAELKRVDM HRAWEDEPKY APGQQWPFTR
HQLRRTLALY AHRSGLVTLP TLKRQLQHIT QEMSMYYARG SAFAKGFIDI DRTHFAKEWV
ETQSLSEYLA YAQQVLFSDE RLFGGHAAWT QSRAVQASPV SVYSRDQTVR MFRKGELAYR
ETVLGGCASI EPCKSTPLDW MRLDCLESNC RNLVVVPSKL QRVIKAQQVT VGKLRAVDDA
SVEYRIEVRT LQRLLDAQER LIKPEVT
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