| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0233 |
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| Symbol | |
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| ID | 6282278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 249291 |
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| End bp | 250412 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642619797 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001893886 |
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| Protein GI | 187922244 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCG TGTTGTTTTC GGTGTATCGG GATTTACATT CGAATATCAA CGGTATTGGC
CGGTGGGCAT TGGGGTCTCT GATACTTGCC GTAACGGCGG TCCTGTTCGG ATTACGTGAG
GTGATACCTG ACTGGCTGTC AGTGATCGTG GCAAATGCCG GTCTGCTGTG TGGTGTCGGT
TTGTGGCTAG TCGGCACCCA GTTGTTTTAC GGACGCAAGC CCTCCTGGGC CAGCGTGAGT
GCGGCAACGA TCCTGACAAT GGCGTGCGTC AGCTGGTGGC TGCTTGTGGA ACCCGCCTAT
ACGCTCAGGC TCACGTCGAT CACAGGCTGT TTGCTGGGTC TCTATGGTGT TCAGCTCCTG
CTCGTAGTTC GCTACGGCGT GAGGCATTCC AGTACATATT TTCTGGCATT CGTGCTGCTG
CTTCAGATTG TCGTGCTGCT GATTCGCGGC GTGACCAGCC TGTTACCCAC TCTCGTCCAG
AGCAACTTCC TTTCGCCGGA TCTGATTCAG GCCATTTATT TCGCAACCTA CAGTTTCGTG
ACTTTGCTGC TCGCGCTGGG GTTTGTCATG GTGGCAACTC ACAGATTGAA TATGGAATTG
AAGTGGTATG CAACCCGGGA TCCACTCACC GGCGTTTTTA ACCGACGTGC ATTCGCCGAG
ATTTACCAAC GCGAATATCA GGTGGCACAG CGAACGGGCG GCACATTAGC ATTGTTGATT
GTGGATCTGG ATCACTTCAA GGCAATCAAC GATAAATATG GTCATGACGT TGGCGACAAG
GTGCTGGTTG ATTTTTGCCG GCGCGCAAAT GCCGTCCTGG TCAACGGTAC TTCCATGGCC
CGTCTGGGTG GGGAGGAGTT CGCGGTCCTG CTTCGCGGGG TGAGTCTGGA AGATGCGTCT
GCCCAGGCTG AAAGAATTCG CTTGTCCCTG TTGCAGGATG GAGATAACGA ACTACCTGGC
TATACATGCA GTGTGGGTGT TGCTACTACA GCGAAAGACG GGAGTGCGCT GGAGCAATTG
CTTCGGGTGG CCGACGACGC GTTATATCAT GCCAAGCGCG AAGGGCGAAA CCGCGTGGAA
TCCATGAAGA CTTCGTTTGA GATCAGATCA GCACCGGAAT GA
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| Protein sequence | MSSVLFSVYR DLHSNINGIG RWALGSLILA VTAVLFGLRE VIPDWLSVIV ANAGLLCGVG
LWLVGTQLFY GRKPSWASVS AATILTMACV SWWLLVEPAY TLRLTSITGC LLGLYGVQLL
LVVRYGVRHS STYFLAFVLL LQIVVLLIRG VTSLLPTLVQ SNFLSPDLIQ AIYFATYSFV
TLLLALGFVM VATHRLNMEL KWYATRDPLT GVFNRRAFAE IYQREYQVAQ RTGGTLALLI
VDLDHFKAIN DKYGHDVGDK VLVDFCRRAN AVLVNGTSMA RLGGEEFAVL LRGVSLEDAS
AQAERIRLSL LQDGDNELPG YTCSVGVATT AKDGSALEQL LRVADDALYH AKREGRNRVE
SMKTSFEIRS APE
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