| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0226 |
|---|
| Symbol | |
|---|
| ID | 6283809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 241745 |
|---|
| End bp | 243148 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642619791 |
|---|
| Product | Gluconate 2-dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001893880 |
|---|
| Protein GI | 187922238 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTA CGCTCCGGCC GGGGACCATC ATCGCCGGTC TCGTCGCGCT CGCCGTGGTG
ATCGTTGCGT GCGCATGGAT CGTCGCGGCG CTATTCGGCG GCCGCGGCGG TAGGGCTCAC
GACGCGGCAC TCGAAGCGGA AGCGCCGATC GACGCGAACG ACACTGCGCT CATCCGCCGC
GGCGCCTACC TGGCCGTTCT CGGCGACTGC GCCGCCTGCC ATGTCGCCAA AGACGGCAAG
GCCTTTGTTG GCGGCCTGCC GATTACCACG CCCATCGGCA CGCTCTACAC CACCAACATC
ACTCCGGACC CGGCGACCGG CATCGGCAAC TACACGCCAA GCGATTTCGA GCGCGCGGTG
CGTCGCGGGA TCCGCAGGGA CGGCAGCCCG ATGTATCCGG CCATGCCCTA TCCATCGTAC
GCCCACGTCA GCGACGACGA CGTGCGCGCG CTTTACGCGT ACTTCATGCA CGGCGTCGCT
CCCGTCGACT CGCCGAACCG CGCGTCCGGC ATTCCGTGGC CGCTGTCCAT GCGCTGGCCG
CTTACGTACT GGCGCTGGGC CTTCGCGCCG AAGGTGCAGC CTGCCGCACA TACGGACATC
GACAGCGCGA CGGCTGCAGG GGCCGCGCAC GATGCGGCAC TGCTGGAGCG CGGGCGCTAT
CTCGTCGAAG GGCTCATGCA CTGCGGCAGC TGTCACACGC CGCGGGGTGT CGGTCTGCAG
GAGAAGGCAC TCGGGGACGC GGATGGCTCC GACTATCTGT CCGGCGGCGT TATCGACCAT
TACGTTGCGA ACAGTCTACG CGGGGACGAC CTGACCGGGC TGGGCCGGTG GAGCCAGGCC
GATATCGTCG AATTTCTGCG CACCGGACGC AACCCAGAGA CGGCCGCGTT CGGTGGCATG
CGTGATGTTG TCCAGCACAG CTCGCAGTTT CTGAACGACA CCGACCTGCT TGCGGTCGCC
ACGTACCTGA AGTCGCTGCC GGGGAATCAT CCGGCCGGGC ACTACGCGTA TGCGGCCGCG
GCCGGCGCCG CGCTCGCGAA GGGCGACGTG AGCGCGCGTG GCGCAATCGA TTACCTGAAC
AGCTGCGCGG CATGCCATCT ATCGTCAGGC AAGGGCTACC GCGACACGTT CCCCGCGCTC
GCCGGCAATC CGGTCGTCAA CGCGAAAGAT CCGACGTCGC TGATCAACAT CGTGCTCAAC
GGCAACACCG AGGTCGGGAC TTCGCGCGTG CCGACGCAGT TCACGATGCC GCCCTTTGGC
GACCGCCTGA CCGACGCCGA GGTCGCCAAC GTCGTCACGT TTATCCGGAC GAGCTGGGGC
AACCACGCGC CGGACGTCAA TGCAGACGAA GTTGCGAAAG TGCGTGCGCA GACGCACGCA
CCAACCGTTG CGCGCCGCCA ATGA
|
|---|
| Protein sequence | MKTTLRPGTI IAGLVALAVV IVACAWIVAA LFGGRGGRAH DAALEAEAPI DANDTALIRR
GAYLAVLGDC AACHVAKDGK AFVGGLPITT PIGTLYTTNI TPDPATGIGN YTPSDFERAV
RRGIRRDGSP MYPAMPYPSY AHVSDDDVRA LYAYFMHGVA PVDSPNRASG IPWPLSMRWP
LTYWRWAFAP KVQPAAHTDI DSATAAGAAH DAALLERGRY LVEGLMHCGS CHTPRGVGLQ
EKALGDADGS DYLSGGVIDH YVANSLRGDD LTGLGRWSQA DIVEFLRTGR NPETAAFGGM
RDVVQHSSQF LNDTDLLAVA TYLKSLPGNH PAGHYAYAAA AGAALAKGDV SARGAIDYLN
SCAACHLSSG KGYRDTFPAL AGNPVVNAKD PTSLINIVLN GNTEVGTSRV PTQFTMPPFG
DRLTDAEVAN VVTFIRTSWG NHAPDVNADE VAKVRAQTHA PTVARRQ
|
|---|
| |