Gene Bphyt_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0204 
Symbol 
ID6281761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp221416 
End bp222198 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID642619770 
Producthypothetical protein 
Protein accessionYP_001893859 
Protein GI187922217 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.333866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCGGC CTGTCTTAGC CGCACAGCAG TTACGCACGC CCGAGGAACG GGCGCGCTCC 
CTCGATGCTG CGCTCGACAG AAATATGTAT TCGGAGTCGG GGGGAATAAC GCTTTGGCGC
GGGGCTCAGC TCGCGCGCGT TCACGGCAGG ACGGTCGACA CCGGCTACGC GGCCTTGTCG
GCCGAGCTAC CCGGCGGCGG CTGGCCACTG GGTGCATTGG TGGAGCTGCT GGTCCAGCAA
CCAGGGATTG GCGAGATGCG ACTCCTGAAG CCGGCGCTCG CCGAACTCAG CGCACGTCCA
ATTGCGCTCT TGCAGCCGCC GCATGTCCCT AATTCGCTGG CGTTCGCGTA TCTCGGGGTG
CCGGTCGAAC GACTGATGAG GCTGCGAGCA CCAAAAACGG CGGATGCGCT CTGGTGTGCA
GAACGCGTGC TTCAGGCGGG GAGCTGCGGC GCGCTCATTT TGTGGCAACA GCACATCCGA
ACCGAGGCGC TGCGGCGATT ACACCTGGCA GCGCAAACGT CGGAAACGCT GCTTGTGCTC
ATTCGGCCGC TCGCCAGCGC GCAGGATTCT TCGCCAGCCA CGTTGCGGCT GGGAGTGCGA
CCCGCTGACG GTGGCCTCGT CGTCGATGTC GTCAAGCGAC GGGGCCCAAT ACGAAGCGAA
ACGCTGTCCA TCACTCTGCA ACCGTCTCCG ATTCTTCTCA GCCCCTATGG CCGTGTTCGT
CGCCATCTTC CTGCCCCGGC TTTCGCTGGA GGTGTTCCGT CCGAGGTGGT CACCTCGCAC
TGA
 
Protein sequence
MGRPVLAAQQ LRTPEERARS LDAALDRNMY SESGGITLWR GAQLARVHGR TVDTGYAALS 
AELPGGGWPL GALVELLVQQ PGIGEMRLLK PALAELSARP IALLQPPHVP NSLAFAYLGV
PVERLMRLRA PKTADALWCA ERVLQAGSCG ALILWQQHIR TEALRRLHLA AQTSETLLVL
IRPLASAQDS SPATLRLGVR PADGGLVVDV VKRRGPIRSE TLSITLQPSP ILLSPYGRVR
RHLPAPAFAG GVPSEVVTSH