| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0202 |
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| Symbol | |
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| ID | 6281759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 216867 |
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| End bp | 219998 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642619768 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001893857 |
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| Protein GI | 187922215 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0663239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCCAG AGTACGCGGA GCTTTTCGCC TTCACCAACT TCTCGTTCCT CCGCGGCGCC
TCGCACGGAG AAGAGCTGGT GCTGCGTGCA TCCCAGCTCG GTTATTCAGG CCTCGCAATA
ACCGACGAGT GTTCGCTCGC CGGCGTCGTA CGCGCCCATG TCGAAGCGAA GAAAGAAAAG
CTCCCCCTGG TCATCGGCTC GTACTTTCAG CTCGTGAATG CAGACCGGTC GCCGGCCTTC
GGTCTCATCT TGCTGGCGCA AAATCGCGAG GGCTACGGCA ACCTTTCCGA ATTCATCACG
CTCGGACGCA TGCGTGCAGC GAAAGGCGAA TACCTGCTCA CGCCGCACGA CATCTCGAAG
CCAGAGAAAG GCTACACGCA TCTGCGGGGA ATGCCGGACT GCCTCGCCAT TCTGGTGCCC
GATTTCCCGG CGACCGAAGA TGCGCTGGCC GTCCAGCTCG AATGGATGAA CGACGTGTTC
GCGGGACGTG CATGGGTCGG ACTGACGCTG CACCAGCACG CGATGGACGA CATCCATCGG
GGCATCGTCG AGCATGTGGC GGACCAGTAT CGCGTACCGG TCGTGGCGAC GGGCAACGTC
GTCATGCATG TCCGCTCGCG TAAGCCGCTG CAGGACACGA TGACGGCAAT CCGGTTGCGT
AAGACCGTCG CCGAATGCGG ATACGACCTC GCGCCAAACG CCGAGGGCCA TCTGCGTTCT
CGGTTTCGGC TGGGGAACCT GTATCCGACG CGTGCACTGT ACGAGACGCT CAACATTCTT
GAACGGTGTA ACTTCTCACT CGACGAGCTT CGCTACGAAT ATCCCGACGA GCTCGTGCCA
GAGGGTTTTA CGCACGAAGC GTATTTACGG CAGGAGACAT ACATCGGTGC GCACCGGCGC
TATCCCAACG GCATTCCGCA CAACGTCCAG GAGCAGATTG AGCACGAGCT ACAGCTCATC
CGCGAACTGG AATATGAGGC CTATTTCCTC ACGGTCTACG ACATCGTGCG CTTTGCCCGC
AGTCAGCACA TCCTGTGTCA GGGGCGCGGG TCGGCGGCGA ATAGTGCGGT CTGTTACTGC
CTCGGCGTGA CGGAGGTCGA CCCATCACGC GGGAACATGC TGTTCGAGCG CTTTATCAGC
AAGGAACGTG GCGAGCCACC CGACATCGAC GTGGACTTCG AGCATCAACG TCGCGAAGAG
GTCATCCAAT ACATCTACCG GAAGTACGGG CGCGACCGTG CGGCGATTGC TGCAGCGGTA
TCCACATACC GGCCACGCGG CGCGCTGCGC GAAAGCGGCA AGGCGCTCGG CGTCGACCCG
CAAATTGTGG ACAAGGTGGC GAAATCGCAT CAGTGGTTCG ACCATTCGGC CGACCTGCTT
CAACGCTTCG CTGAATCCGG ACTGGACCCG GAGAATCCGC TCATCGGTCT CTGGGCGAAG
CTTGCTGCTC AGATTCTCAA CTTTCCACGC CACCTGTCGC AGCACTCCGG TGGCTTCGTC
ATCAGCCGCG GCAAGCTCAC GCGGCTGGTC CCCGTCGAGA ACGCGACGAT GGCAGACCGC
TCCGCCATTC AGTGGGACAA GGACGACCTG GAAGCGCTCG GCCTGTTGAA AATCGATGTG
CTCGCACTTG GCATGCTGTC GGCCATCCGT CGCACGCTCG ACATCGTGTC AGAGCAGTGC
GGTGAGCGTT TCGAGATGCA GGACATACCT CCCGAGGACG CGGCGACCTA CGAGATGATT
TCGCGGGCGG ACACCGTGGG CGTGTTCCAG ATTGAGTCGC GTGCGCAGAT GAGCATGCTG
CCGCGGATGA AGCCCCGAGA GTTCTACGAC CTCGTTATCG AGGTGGCCAT CGTGAGGCCG
GGCCCGATTC AGGGCGGCGC AGTGCATCCT TACCTGCGCC GGCGCCAAGG ACTGGAGCCG
GTGACGTATC CGAGCGACGC ATTGGAGGTC GCTCTCGGGC GAACGCTTGG CGTGCCCATC
TTCCAGGAGC AGGTGATGCA GGTGGCCATC CTGGCTGCCG GTTTTACGCC GGGCGAAGCG
GACCAGTTGC GCCGCGCGAT GGCCGCCTGG AAACGTAAGG GTGGTCTCGA CAAATACTAC
GACCGCATCG TCAACGGTAT GACCGAGCGC GGTTACACGA AGGACTTCGC CGAATCCATC
TTCCAGCAAA TTCACGGTTT TGGCGAATAC GGCTTCCCGG AAAGCCACGC GGCGAGCTTC
GCGCTGCTTG TGTACGCGAG CAGCTGGCTG AAGTGTCATG AGCCGGAGGC GTTCCTCGCG
GCGATGCTGA ACAGCATGCC ACTCGGCTTC TACTCCGCGT CGCAGTTGAT TCAGGATGCG
CAGCGACATG GCGTGAAGGT GCTCCCAGCC GACGTCACCA TCAGCAACTG GGATTCGGTG
CTCGAGCGTG AAACATCGGC ATCCAGGCCA TCAGTACGCC TTGGCCTGTC GCTGTTGAAG
GGCATGAAGG ACGGTGCAGC GGAGCGAATC GAAGCCGCGA GAGCCGTGAG GCAGTTCTCC
AGCGTCAGCG ACCTTGCGCG CCGCGCGCAA CTCGACCGAA ATGACCTCAA GGTTCTGGCA
GCAGCAAACT CGCTGTCACT GCTCGCTGGC AATCGACGCG AAGCGCTCTG GGCGTCCGTC
GCCGCTGTGC CCGACAGCGA CATCCTTGCC GATGCTTGCG TCGATGACGA AACGCCTGCG
TTCGGGGCGC CGTCGGAAGG CGAAGACATC GTCGCAGACT ACAACTCGAT GAGCCTCACG
CTCGGCCGGC ATCCACTTTC CCTTCTGCGG CCAGCCCTGC TAGAACAGCG CCTGATGCCA
GCGGCAACAC TCATGACCTA TCGTAATGGC AGACTCGCTC GTGGCTGCGG GTTGGTCACA
GTGCGGCAAC GGCCGGGAAC GGCGAAAGGC GTGATGTTTC TCACCATTGA GGATGAGACC
GGCAACGTGA ACATCATCAT CTGGACATCG GTTCAGGAGA AGTTCCGGCA GGAGGTGTTG
GGCGCGTCGC TCCTCGCCGT GTACGGAACG TGGCAATGCG AAGGCGAGGT TCGCCACCTG
GTTGCGCAGA GGCTCGTCGA TTTGTCTCAC CTGCTCGGCG GGCTAACGGC AGTCAGTCGC
AACTTCTGCT GA
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| Protein sequence | MLPEYAELFA FTNFSFLRGA SHGEELVLRA SQLGYSGLAI TDECSLAGVV RAHVEAKKEK
LPLVIGSYFQ LVNADRSPAF GLILLAQNRE GYGNLSEFIT LGRMRAAKGE YLLTPHDISK
PEKGYTHLRG MPDCLAILVP DFPATEDALA VQLEWMNDVF AGRAWVGLTL HQHAMDDIHR
GIVEHVADQY RVPVVATGNV VMHVRSRKPL QDTMTAIRLR KTVAECGYDL APNAEGHLRS
RFRLGNLYPT RALYETLNIL ERCNFSLDEL RYEYPDELVP EGFTHEAYLR QETYIGAHRR
YPNGIPHNVQ EQIEHELQLI RELEYEAYFL TVYDIVRFAR SQHILCQGRG SAANSAVCYC
LGVTEVDPSR GNMLFERFIS KERGEPPDID VDFEHQRREE VIQYIYRKYG RDRAAIAAAV
STYRPRGALR ESGKALGVDP QIVDKVAKSH QWFDHSADLL QRFAESGLDP ENPLIGLWAK
LAAQILNFPR HLSQHSGGFV ISRGKLTRLV PVENATMADR SAIQWDKDDL EALGLLKIDV
LALGMLSAIR RTLDIVSEQC GERFEMQDIP PEDAATYEMI SRADTVGVFQ IESRAQMSML
PRMKPREFYD LVIEVAIVRP GPIQGGAVHP YLRRRQGLEP VTYPSDALEV ALGRTLGVPI
FQEQVMQVAI LAAGFTPGEA DQLRRAMAAW KRKGGLDKYY DRIVNGMTER GYTKDFAESI
FQQIHGFGEY GFPESHAASF ALLVYASSWL KCHEPEAFLA AMLNSMPLGF YSASQLIQDA
QRHGVKVLPA DVTISNWDSV LERETSASRP SVRLGLSLLK GMKDGAAERI EAARAVRQFS
SVSDLARRAQ LDRNDLKVLA AANSLSLLAG NRREALWASV AAVPDSDILA DACVDDETPA
FGAPSEGEDI VADYNSMSLT LGRHPLSLLR PALLEQRLMP AATLMTYRNG RLARGCGLVT
VRQRPGTAKG VMFLTIEDET GNVNIIIWTS VQEKFRQEVL GASLLAVYGT WQCEGEVRHL
VAQRLVDLSH LLGGLTAVSR NFC
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