Gene Bphyt_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0190 
Symbol 
ID6284200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp205436 
End bp206818 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content59% 
IMG OID642619759 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001893848 
Protein GI187922206 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000521499 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGATT CGGTTTATGC CGCTCCGAGG CTCGACAGGC TGCCATTGAG TGGTTTTCAC 
TGGCGTCTGT TCCTCCTCAT CGGCGGCGGT CTTTTCCTCG ATGCCTTCGA CGTTTATCTG
GGCGGCGTAG TCACCGGCTC GCTTCTCAAG ACTGGCTGGT CCACGCTTGA GATGAACGCA
TGGTTCACCA CGATGACGTT CGCGGGGCTT ACGGTGGGCG CCTGGAGTGC GGGTGAGCTT
GGCGACCGGT TTGGGCGCAG GTTTTCCTAT CAGGTGAATC TAATCATCTT CGGTGGCGCG
TCGCTTGCTG CGACGCTCGC GCCGAACATG TACTGGCTCA TCGCGCTGCG ATTCATCATG
GGCATCGGGA TGGGGGCAGA GATTGTTATC TCGTACGGCA TGTTGTCGGA GTTCGTACCG
CCCCGTTATA GAGGCCGACT CCTGGCTGCC TTGTCCCTGT TCGCGAACTC CGCAGTTCTT
ATTGCTTCGT TGACCAGTCT GTGGATTATT CCGAACTTCG GGTGGCGTTA CATGTTCGCC
ATCGTCGGGG TCGCGGCAAT CGTCATCTGG CTGCTGCGAA AGAAGATGCC AGAGTCGCCG
AGATGGCTTG TCAGTCAGGG CAGATATGCC GAAGCCGAAG CGGTGCTGCA GTCGATTGAG
GCAGACATCT CACGCAATCA TGAGCTCGAC GACTTCGTGC GGGAGCAGCC GGTAAAGCCA
CAGCACGTTC CCATCGGTGT CCTCTTCAGG TCACCTGTCG TGTGGCGGAC GCTGGTCGGC
TCGCTGATTA TGGTCACTAT CGGCTACAGC GTTTATGGTC TGATTAACTG GCTCCCATCC
TTCTTCGTGC GTCAGGGTTT CGACATCGTC AAGTCGTTGT CGTACAGCAC CGTGATGTCG
TTGGGCGCGC CGGCGGGAAC AATCATCGGC ATTTTCCTCG CCGACCGCGT GGGCCGTCGG
CCCGCAATTA TCGGTGCCGC ACTGGTGACA GCGGCGATGG GCTTGTTCTA TCAGCACGCT
GCTTCGAACA CGATGCTCCT GGTAGCCGGG CTCTGTCTTA TTTGCGGCAT CTACGTCCTC
GTCGCGGTAG GGCAAGGCGC TTATGTTCCG GAACTCTTCG CAACGTCTTA TCGCCTCAGA
GGTAGTGGCG TATGCGGCAC GGCTGGGCGG GCGGCCAGCG CACTTTGCCA GTTCTTCGTC
CTGTGGCTCT TCACCATGGG CGGCGTCAAC ATGGTAGTCG CGTCGGTCGT TGCCATTCAA
GTACTGCTTG CCGTTGCAGT TTGGGCGCTT CGCATCGAGA CAAGCGGCGT GGGTCTCGAC
CATATGCCCG ACGATTTGGA ACATACCGCC GGTCAGCCGA GGATTGCCGA CATTGGTCAC
TGA
 
Protein sequence
MSDSVYAAPR LDRLPLSGFH WRLFLLIGGG LFLDAFDVYL GGVVTGSLLK TGWSTLEMNA 
WFTTMTFAGL TVGAWSAGEL GDRFGRRFSY QVNLIIFGGA SLAATLAPNM YWLIALRFIM
GIGMGAEIVI SYGMLSEFVP PRYRGRLLAA LSLFANSAVL IASLTSLWII PNFGWRYMFA
IVGVAAIVIW LLRKKMPESP RWLVSQGRYA EAEAVLQSIE ADISRNHELD DFVREQPVKP
QHVPIGVLFR SPVVWRTLVG SLIMVTIGYS VYGLINWLPS FFVRQGFDIV KSLSYSTVMS
LGAPAGTIIG IFLADRVGRR PAIIGAALVT AAMGLFYQHA ASNTMLLVAG LCLICGIYVL
VAVGQGAYVP ELFATSYRLR GSGVCGTAGR AASALCQFFV LWLFTMGGVN MVVASVVAIQ
VLLAVAVWAL RIETSGVGLD HMPDDLEHTA GQPRIADIGH