Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0190 |
Symbol | |
ID | 6284200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 205436 |
End bp | 206818 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642619759 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001893848 |
Protein GI | 187922206 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000521499 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGATT CGGTTTATGC CGCTCCGAGG CTCGACAGGC TGCCATTGAG TGGTTTTCAC TGGCGTCTGT TCCTCCTCAT CGGCGGCGGT CTTTTCCTCG ATGCCTTCGA CGTTTATCTG GGCGGCGTAG TCACCGGCTC GCTTCTCAAG ACTGGCTGGT CCACGCTTGA GATGAACGCA TGGTTCACCA CGATGACGTT CGCGGGGCTT ACGGTGGGCG CCTGGAGTGC GGGTGAGCTT GGCGACCGGT TTGGGCGCAG GTTTTCCTAT CAGGTGAATC TAATCATCTT CGGTGGCGCG TCGCTTGCTG CGACGCTCGC GCCGAACATG TACTGGCTCA TCGCGCTGCG ATTCATCATG GGCATCGGGA TGGGGGCAGA GATTGTTATC TCGTACGGCA TGTTGTCGGA GTTCGTACCG CCCCGTTATA GAGGCCGACT CCTGGCTGCC TTGTCCCTGT TCGCGAACTC CGCAGTTCTT ATTGCTTCGT TGACCAGTCT GTGGATTATT CCGAACTTCG GGTGGCGTTA CATGTTCGCC ATCGTCGGGG TCGCGGCAAT CGTCATCTGG CTGCTGCGAA AGAAGATGCC AGAGTCGCCG AGATGGCTTG TCAGTCAGGG CAGATATGCC GAAGCCGAAG CGGTGCTGCA GTCGATTGAG GCAGACATCT CACGCAATCA TGAGCTCGAC GACTTCGTGC GGGAGCAGCC GGTAAAGCCA CAGCACGTTC CCATCGGTGT CCTCTTCAGG TCACCTGTCG TGTGGCGGAC GCTGGTCGGC TCGCTGATTA TGGTCACTAT CGGCTACAGC GTTTATGGTC TGATTAACTG GCTCCCATCC TTCTTCGTGC GTCAGGGTTT CGACATCGTC AAGTCGTTGT CGTACAGCAC CGTGATGTCG TTGGGCGCGC CGGCGGGAAC AATCATCGGC ATTTTCCTCG CCGACCGCGT GGGCCGTCGG CCCGCAATTA TCGGTGCCGC ACTGGTGACA GCGGCGATGG GCTTGTTCTA TCAGCACGCT GCTTCGAACA CGATGCTCCT GGTAGCCGGG CTCTGTCTTA TTTGCGGCAT CTACGTCCTC GTCGCGGTAG GGCAAGGCGC TTATGTTCCG GAACTCTTCG CAACGTCTTA TCGCCTCAGA GGTAGTGGCG TATGCGGCAC GGCTGGGCGG GCGGCCAGCG CACTTTGCCA GTTCTTCGTC CTGTGGCTCT TCACCATGGG CGGCGTCAAC ATGGTAGTCG CGTCGGTCGT TGCCATTCAA GTACTGCTTG CCGTTGCAGT TTGGGCGCTT CGCATCGAGA CAAGCGGCGT GGGTCTCGAC CATATGCCCG ACGATTTGGA ACATACCGCC GGTCAGCCGA GGATTGCCGA CATTGGTCAC TGA
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Protein sequence | MSDSVYAAPR LDRLPLSGFH WRLFLLIGGG LFLDAFDVYL GGVVTGSLLK TGWSTLEMNA WFTTMTFAGL TVGAWSAGEL GDRFGRRFSY QVNLIIFGGA SLAATLAPNM YWLIALRFIM GIGMGAEIVI SYGMLSEFVP PRYRGRLLAA LSLFANSAVL IASLTSLWII PNFGWRYMFA IVGVAAIVIW LLRKKMPESP RWLVSQGRYA EAEAVLQSIE ADISRNHELD DFVREQPVKP QHVPIGVLFR SPVVWRTLVG SLIMVTIGYS VYGLINWLPS FFVRQGFDIV KSLSYSTVMS LGAPAGTIIG IFLADRVGRR PAIIGAALVT AAMGLFYQHA ASNTMLLVAG LCLICGIYVL VAVGQGAYVP ELFATSYRLR GSGVCGTAGR AASALCQFFV LWLFTMGGVN MVVASVVAIQ VLLAVAVWAL RIETSGVGLD HMPDDLEHTA GQPRIADIGH
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