| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0189 |
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| Symbol | |
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| ID | 6284199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 204111 |
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| End bp | 205199 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642619758 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001893847 |
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| Protein GI | 187922205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.615373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00390966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCGGCA TTGTCGGCTT GCATGCGCAT GCCGCGTGGA GTCAGTCAGC CGTAACTCTG
TACGGGGTCA TCGACGAGGC AATCCGCTAC GACAACCATC AGACACGCGA CGGCGGCCAT
AACATCACCA TGGGTACGGG CGGCGCGCTC CTTGGAAGCA GGTGGGGGCT GCGTGGTACC
GAAGATTTGG GCGGCGGCAG CAAAGCGATA TTTGTGCTGG AATCTGGTTT CGTTGCGAAC
ACGGGCGCAC TTGCGTTCTC GACGCCGGGA GGGCAGCAGC GTCTGTTCGG ACGACAAGCA
TTCGTCGGGT TTTCACACCA AGGATTGGGC ACGGTAACTT TCGGTCGGCA ATACGCCCTC
GCCTATCTGA TGGGGTCCGC GCATGACGTA TTTGGGTTCG CCAATTACGC AGCAACGTGG
GGATTTCAAT CTGCCGGCCT AGTGGGCGGT GCGCGTCTCG ATAACACTGT TCAATACACA
TCCGACAAGC TTTTTGGGTT CACGGTAAGT GGCGCCTACA CGTTTGGCGG TGTAGCGGGC
GATATACATC GCTATTCCTC GCCGGCCGTC AGTTTGAGCT ACGACGTTGG TCCTTTGAAC
ATTGGCGCGG TGTATCAGCA GGTCAACAAC ATTGGCGGAG CAACGCCAGC TAGCACGCAG
TACGGCAATA CCTATTTCGG CATCGCCATT CCGGACAGCT CTCAAAAGAT TGCGATGGTG
GGTGCGACCT ATGCGCTTGC CCAAGCCAAA ATCTACGCGC AATACATCTT CAGTCACGTC
TATCCGGCTG ATTATCGCAA TGACTCGTTC TCGGTAGGCG CATCCTATCT GTTCACGCCG
TCCATAGAGT TGCGTGGTGC CGCCTATGTC GACATCCTGC ATCATGCAGA TGGCGAAGGT
ACGCGCGTCA CGGCAGGCCC GATTCTTCTT TACCATCTGT CCAAGCGGAC AGATTTGTAC
TCCGGCGTCA ATTACAATCA TCTCACCGGT CAGTGGACCA AACTTGCTTC GACTTCTGGC
TTTACCCAAT CCTTTAATGG ATACAACTCT CTGTTCGAGG GCGTCGTCGG CATGATTCAC
CGGTTCTAA
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| Protein sequence | MVGIVGLHAH AAWSQSAVTL YGVIDEAIRY DNHQTRDGGH NITMGTGGAL LGSRWGLRGT
EDLGGGSKAI FVLESGFVAN TGALAFSTPG GQQRLFGRQA FVGFSHQGLG TVTFGRQYAL
AYLMGSAHDV FGFANYAATW GFQSAGLVGG ARLDNTVQYT SDKLFGFTVS GAYTFGGVAG
DIHRYSSPAV SLSYDVGPLN IGAVYQQVNN IGGATPASTQ YGNTYFGIAI PDSSQKIAMV
GATYALAQAK IYAQYIFSHV YPADYRNDSF SVGASYLFTP SIELRGAAYV DILHHADGEG
TRVTAGPILL YHLSKRTDLY SGVNYNHLTG QWTKLASTSG FTQSFNGYNS LFEGVVGMIH
RF
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