Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0181 |
Symbol | |
ID | 6284123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 194654 |
End bp | 195394 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642619754 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_001893843 |
Protein GI | 187922201 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0243891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCC GTATTGCATA TGTCACGGGC GGCATGGGTG GCATCGGTAC AGCAATCTGC CAGCGGCTGC ACAAGGAGAA CTTCACTGTT GTCGCGGGCT GCGGACCGAA CTCGACGCGC CGTGCCCGAT GGCTGGAGGA GCAGAAGACA CTCGGCTATT CCTTCATCGC CTCCGAGGGC AACGTCGCCA ACTGGGAGTC GACGGAAAAG GCCTTCAAAA AGGTCAAAAA GGAAGTTGGC GAAATCGACG TGCTGATCAA TAACGCGGGC ATCACGCGCG ATGGCGTGTT CCGGAAAATG ACCCACGAAG ACTGGACTGC CGTCATCGAC ACCAATCTCA ACAGCCTTTT CAACGTGACA AAACAGGTGA TCGAAGGCAT GGTCCAGCGT GGCTGGGGGC GCATCGTCAA CATCTCTTCG GTGAACGGAC AGAAAGGCCA GTTCGGCCAA ACCAACTACT CCACGGCCAA AGCGGGCATT CACGGCTTCA CCATGGCGCT GGCGCAGGAG GTCGCTGTAA AGAACGTGAC GGTCAATACC GTATCGCCCG GCTACATTGG TACCGAGATG GTACGTGCAG TGCGCCCCGA TGTACTTACG AAGATCGTGG AGAGCATTCC GGTGCGGCGG CTGGGCAATC CGGAAGAAAT CGCATCGATC GTGGCATGGC TCGCTTCCGA TGACGCCGGG TTTGCGACAG GCGCGGACTT TTCATTGAAT GGCGGGCTGC ATATGGGCTA G
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Protein sequence | MATRIAYVTG GMGGIGTAIC QRLHKENFTV VAGCGPNSTR RARWLEEQKT LGYSFIASEG NVANWESTEK AFKKVKKEVG EIDVLINNAG ITRDGVFRKM THEDWTAVID TNLNSLFNVT KQVIEGMVQR GWGRIVNISS VNGQKGQFGQ TNYSTAKAGI HGFTMALAQE VAVKNVTVNT VSPGYIGTEM VRAVRPDVLT KIVESIPVRR LGNPEEIASI VAWLASDDAG FATGADFSLN GGLHMG
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