Gene Bphyt_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0181 
Symbol 
ID6284123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp194654 
End bp195394 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content58% 
IMG OID642619754 
Productacetoacetyl-CoA reductase 
Protein accessionYP_001893843 
Protein GI187922201 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0243891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC GTATTGCATA TGTCACGGGC GGCATGGGTG GCATCGGTAC AGCAATCTGC 
CAGCGGCTGC ACAAGGAGAA CTTCACTGTT GTCGCGGGCT GCGGACCGAA CTCGACGCGC
CGTGCCCGAT GGCTGGAGGA GCAGAAGACA CTCGGCTATT CCTTCATCGC CTCCGAGGGC
AACGTCGCCA ACTGGGAGTC GACGGAAAAG GCCTTCAAAA AGGTCAAAAA GGAAGTTGGC
GAAATCGACG TGCTGATCAA TAACGCGGGC ATCACGCGCG ATGGCGTGTT CCGGAAAATG
ACCCACGAAG ACTGGACTGC CGTCATCGAC ACCAATCTCA ACAGCCTTTT CAACGTGACA
AAACAGGTGA TCGAAGGCAT GGTCCAGCGT GGCTGGGGGC GCATCGTCAA CATCTCTTCG
GTGAACGGAC AGAAAGGCCA GTTCGGCCAA ACCAACTACT CCACGGCCAA AGCGGGCATT
CACGGCTTCA CCATGGCGCT GGCGCAGGAG GTCGCTGTAA AGAACGTGAC GGTCAATACC
GTATCGCCCG GCTACATTGG TACCGAGATG GTACGTGCAG TGCGCCCCGA TGTACTTACG
AAGATCGTGG AGAGCATTCC GGTGCGGCGG CTGGGCAATC CGGAAGAAAT CGCATCGATC
GTGGCATGGC TCGCTTCCGA TGACGCCGGG TTTGCGACAG GCGCGGACTT TTCATTGAAT
GGCGGGCTGC ATATGGGCTA G
 
Protein sequence
MATRIAYVTG GMGGIGTAIC QRLHKENFTV VAGCGPNSTR RARWLEEQKT LGYSFIASEG 
NVANWESTEK AFKKVKKEVG EIDVLINNAG ITRDGVFRKM THEDWTAVID TNLNSLFNVT
KQVIEGMVQR GWGRIVNISS VNGQKGQFGQ TNYSTAKAGI HGFTMALAQE VAVKNVTVNT
VSPGYIGTEM VRAVRPDVLT KIVESIPVRR LGNPEEIASI VAWLASDDAG FATGADFSLN
GGLHMG