| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0173 |
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| Symbol | |
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| ID | 6280817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 186454 |
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| End bp | 188367 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642619747 |
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| Product | Primase 2 |
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| Protein accession | YP_001893836 |
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| Protein GI | 187922194 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.214274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC GCTACCTGAG CGAAGAAGAA CGCGCCCGTG CGGCGCTGGC CATGATCCCG
TCCGGGGACT ACGCGACCTG GGTCGATATG GCCTTCGCGC TCAAACAGGG GTTCGGCGAG
GCCGGCTTCG ACATCTGGGA CGAGTGGAGC CGGACCGCCC ACAACTACAG CGAGCGTGCC
GCGCGCGTGA CGTGGCGTTC AGCCGGTGAG TCGGGCGGCA AGACGCTCGC CTCGCTCTTC
TGGCTGGCGC AGCAGCACGG CTTCGACGTC CGGGCTTCGC GTGCGGCGAT GGATCCCGCG
GACAGGTCGC GGATGCAGCC GATCCGCCCG TCGGAGGAAC AGGCCCGACA GGGCGCGCAG
CTCGAGGCCC GCGTGCGCGC GCGACAGGAG GCTGTCGCCC GGGAAGCACT CGCGATCTGG
AAGTGGGCCC GGCCCGTGGG TCCAGACCAT CCGTATCTCG AACGCAAGCA GGTGAGGCCC
GTGCCGGCGC TGCGCGAGCT GGAGGCCGAA GAACTGCACG CGCTGCTCGG CTACGCGCCG
CGTAGTGCCG AAGAGCCGCT CACGGGGCGT GTACTGGTTG TGCCGGTCCG CATCGGTGAC
GCCCTTTCGA CGCTGGAACT GATCGACGCC GACGGGCGCA AGTCAGCGCT CGCGGGCGGC
GCGAAGTCCG GCGGCTGCTG GGTCGTCGAA CCGGGCCAGT TCCGTGAGGG CGCCGTGACG
CCGGTCCTGA TTGCCGAGGG CGTCGCCACG GCACTGGCGG CGTGGCAGGC GACGGGCTGG
TTCAGCGTGG CCGCCCTGTC GAGCGGCAAC CTGCGGCCGG TGGCTGCCAT GTGGCGCGGC
CGCTATCCGG AAGCGGAGGT GCTCGTGCTC GCCGATCTCG GCGCCGGATA TGAGCATGCG
AAGCAGGCCG CGCTCGGCAC GTCGTCACTG CTGGCTGAGC CCCGTTTTGC ATCGGACGCC
CGCATTGCCG GTGCGATACC GACCGATTTC GACGACATGG CCGTACTGTC CGGAACCGGC
GCGGTCGGTG ATCTTTTACG GGAATCGCTT TACGGCGTGC GGGTGCGGGA TGCAACAGGT
GCGGAAGTGG ACGGACCAGT CGCGGTTGCA CAGGGAGCAG AGGGTGTACT GAAGGAGGAC
CATGCAATGG GCAATGTGAA AGAGAAACTC GTGGGCGATG GAGAGGCTTC GGGGCGGCGC
CGTACTTCGC GCCGTCGGGC TGGCCATCAG GACGCGCCGG AACCGGCACC GCAGGACAGC
ACCGCACCGG AACCGGCAAC TGAACAGCCC CAGTCGCAAT CGCAATCGCC GGAGCCGGTT
CCGGAACAGC GGGAAACCGA TGCACCGAAA CCTGCTCGTA TGTCAGCGCG CGATGCGGAA
CCGCCGGCGC GCCGCCGGGT AGGTGAGCCA CTGTACGGAT TCGACGAAGT CCCCGGTGAG
ATCAAGGCAC TCGCGCAGCA CCGGTTCGGC GCGCAGATCC GCATGGCGAC GCCCCGCGAG
AATGGCGGAC CGTACCGCGG CGAGGTGTTC AACACCGAGC ACTACCTGAT CCAGGAGGTG
TCCACGCGCA GCGTCGTGTT CCATGCGAAG TCGAACATGG AGTTCGTCTC GGACCGCCTG
CGGTGGATGG ATGAGAACCA GCGGCTCAAC GGCGCGGAGG TGCAGGTCGG GTATGACGGC
GCACGGGCGA AAGTGTATCC ATGGGACCGC GCCCGCGACC TGCTCGAGCG CACGGTCGCC
TCGCTGAAGA AGTCTGCCCG CGAGGTGGGT TTCGGCAGCG AGCTCGACGC GACACTGGAC
CAGCTGCAGA CGATATCGTG GACCCGGGTG CGGGAAGCAC GGGCGGCGGC GCTCGCGCAG
TCGAAGGAGC GTGCAGGCCG CGAACAGGAG CAGGGACCGG GGCCGCAACG CTGA
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| Protein sequence | MNTRYLSEEE RARAALAMIP SGDYATWVDM AFALKQGFGE AGFDIWDEWS RTAHNYSERA
ARVTWRSAGE SGGKTLASLF WLAQQHGFDV RASRAAMDPA DRSRMQPIRP SEEQARQGAQ
LEARVRARQE AVAREALAIW KWARPVGPDH PYLERKQVRP VPALRELEAE ELHALLGYAP
RSAEEPLTGR VLVVPVRIGD ALSTLELIDA DGRKSALAGG AKSGGCWVVE PGQFREGAVT
PVLIAEGVAT ALAAWQATGW FSVAALSSGN LRPVAAMWRG RYPEAEVLVL ADLGAGYEHA
KQAALGTSSL LAEPRFASDA RIAGAIPTDF DDMAVLSGTG AVGDLLRESL YGVRVRDATG
AEVDGPVAVA QGAEGVLKED HAMGNVKEKL VGDGEASGRR RTSRRRAGHQ DAPEPAPQDS
TAPEPATEQP QSQSQSPEPV PEQRETDAPK PARMSARDAE PPARRRVGEP LYGFDEVPGE
IKALAQHRFG AQIRMATPRE NGGPYRGEVF NTEHYLIQEV STRSVVFHAK SNMEFVSDRL
RWMDENQRLN GAEVQVGYDG ARAKVYPWDR ARDLLERTVA SLKKSAREVG FGSELDATLD
QLQTISWTRV REARAAALAQ SKERAGREQE QGPGPQR
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