| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0169 |
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| Symbol | |
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| ID | 6280813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 181925 |
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| End bp | 183127 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642619743 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001893832 |
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| Protein GI | 187922190 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.340419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGC AGACGCCGCG CAATGCGATT GCGCCCGATA CCGACCCCGC AAAGGTCACT
GATACCATAA ACGGTGACCT TGCGAGTCCG CCGACGGATC GCGGCATGCC GGAGCTGGGA
CAGGCGGGCG GCCGGCCCCG TGTCTGGTGG CTTGCACCAC TGTTGATTGT GGCCTTCGTG
ATCGGTGGAG CGGTCTGGAC GATCCACGGC TTCCTTGCCC GGCACGATGC GGCGGAGAAG
GCGAAGCGCG ATACCGTACA GGACCAGGTA GCCCAGGGGC GCGTGTTCGG CGACGGCGCC
GCCCCGGCGT CGGCGGGTAC AGCAAGCGGT CCGGTGGCCA CAAGTGCGAC CGCATCGGCA
CCGGTTGTAG CGTCAGCACG CCCGACTTCC GCACACACTG CACCGGCGCG CAGCTACTAC
GACGCGCCGC TGCTCTCGAC CGGCTCAAGT GGTTCGGCCA ACGGCGAGGC CGATACGGTG
GCATCCGCAC CCGCTGACGC GTCCGGTACG CAGACAAACG TGGCGATGGT GTCCGGAGGC
CAGTCGTCGC AGGGCAGCGG CCCGCTTGCC CAGGCGCTGA CGCCGACCGT CACGCCGAAG
GTGCGTGCGG GCTTTCTCGG CAACCGCAGC CTGATTCTTG CAGAAGGCGC CAAGATCGAC
TGCGCCGGCG ATACGGCATT CGATTCGACC CAGGCGGGTA TTTCGACCTG TACGGTGACG
AAGAACGTCT ACTCGGACGA TGGTCGTGTC GTGCTGATCG AGCGCGGCTC GCAGATCAAC
AGCGAGTATC GCTCGAACCT GGCACCCGGA CAGAAGCGGG TGTTCATCCT GTCGGCACGG
ATCCGGACGC CGGAAGGGGT GACGGTCGAG ATCGATTCAC CAGCAGCCGA TGCGCTCGGC
CGCATGGGGA TCGACGGATA CGTGGATAAC CACTGGGGGG CACGGATCGG TGCGGCGCTG
CTGCTCGGGC TGACGCAGGA CGCGATCGGC TACCTTGCGA CGCGGGGCGG CAACGGCAAC
AGCTCGACCA TCTACGAGAA CACGCAGCAG CAGGGCAACG ACATGGCCTC GCGTGTGCTC
GACAGCACGA TCAACATTCC GCCCACCCTG ACGCAGAACC AGGGGGCCGA GTTCACGATC
GTCGTCGCAC GGGACCTGGA TTTCAGCCCG GTGTATGCGC TTCAGCCGGA GGGCACGCGA
TGA
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| Protein sequence | MNEQTPRNAI APDTDPAKVT DTINGDLASP PTDRGMPELG QAGGRPRVWW LAPLLIVAFV
IGGAVWTIHG FLARHDAAEK AKRDTVQDQV AQGRVFGDGA APASAGTASG PVATSATASA
PVVASARPTS AHTAPARSYY DAPLLSTGSS GSANGEADTV ASAPADASGT QTNVAMVSGG
QSSQGSGPLA QALTPTVTPK VRAGFLGNRS LILAEGAKID CAGDTAFDST QAGISTCTVT
KNVYSDDGRV VLIERGSQIN SEYRSNLAPG QKRVFILSAR IRTPEGVTVE IDSPAADALG
RMGIDGYVDN HWGARIGAAL LLGLTQDAIG YLATRGGNGN SSTIYENTQQ QGNDMASRVL
DSTINIPPTL TQNQGAEFTI VVARDLDFSP VYALQPEGTR
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