Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0168 |
Symbol | |
ID | 6280812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 181087 |
End bp | 181932 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619742 |
Product | Conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_001893831 |
Protein GI | 187922189 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.313192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACGA ACACATTGAT GAGAGCCACC GCGCTGGCGA CAGCGCTGGC AGTGTTATGT GTTGGCTCGT CCGGGGCGCA CGCCTACGAC GTGCCGGGCT GGTCGGGCGA CTCGCGCGTG CGGCAGGTCG TGTACCGGCA GGACGAGGTG GTGCGGGTTA TCGCGCAGCG CGGCTTCGCC ACGCACATCG CGCTCGATCC GGCCGAACAC ATTCTCGTCG TGGCCCCGGG CGACCGGGAT GGCTGGCAGG TGGTCGCGAA CCGTGGTGAC CATGATGTCT ATCTCAAGCC GCAGCTTGCC GCGCACGACA CGAACCTGGA AATCCGCACC GACCGGCACA GTTACAGCTT CGATCTGGTC GTGCTGCCAC TCAGGGCCCG TTTCGGTAAC GACGATGAGA TGTACCGCAT CACGTTCGTT TATCCGGACG TGGAGGCCGC GAAGACAAAG ACCACTGACG CCGCTGCCCT CGTGCGCGAG CGTCTTGACC AGCCGCCGCG GGTGCGCAAT AGCGCGTACT CGATGCAGGT CATGCCGCAT TCGGAGGACA TCGCGCCGAC AGCGGCCTGG GACGACGGGC GCTTTACCTA CATCCGCATT CCCAACAACC GCCGTATTCC CGCGATCTTC CGGGTGGCCG ACGACGACAG CGAAAGTGTT GTCGACAGGC ACATGGAAGA CGACGTGATC GTCGTGCACG AAGTAGCCCG GCGTTTCGTA CTGCGTCTGG GAAAAGAGGT GGTGGGTCTG TGGAACGACG CGTTCGATGT GGACGGCGTG CCACCTGCCG ATGGCACGAC CGTGAGCGGT GTGAAGCGTG TCCTGCGGAG CGATGGCCAT GAATGA
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Protein sequence | MRTNTLMRAT ALATALAVLC VGSSGAHAYD VPGWSGDSRV RQVVYRQDEV VRVIAQRGFA THIALDPAEH ILVVAPGDRD GWQVVANRGD HDVYLKPQLA AHDTNLEIRT DRHSYSFDLV VLPLRARFGN DDEMYRITFV YPDVEAAKTK TTDAAALVRE RLDQPPRVRN SAYSMQVMPH SEDIAPTAAW DDGRFTYIRI PNNRRIPAIF RVADDDSESV VDRHMEDDVI VVHEVARRFV LRLGKEVVGL WNDAFDVDGV PPADGTTVSG VKRVLRSDGH E
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