| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0167 |
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| Symbol | |
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| ID | 6281711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 180332 |
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| End bp | 181090 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619741 |
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| Product | VirB8 family protein |
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| Protein accession | YP_001893830 |
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| Protein GI | 187922188 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.42485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTG AGCATGACGG CCGTGACGCC GGTGACTCCC TTGGTGATTA CCGGCGGGCA
CTCGATTTCG AGGTGTCGGT CACCCACCTG CAGGAACGCT CGGAGCGTCG TGCGTGGCAC
GTGGCTCTGG CCTGCGTGAC TGTCGCCATC CTGTGCGCCG TCGCACTGGC GGTGATGGTC
CCGTTCTACC GGGTCGTGCC GTTGCCGATC GAGGTCGACC GGCTGACTGG TGAAGCCCAG
GTGATCGACG TGCTGGACTC GAAGCAGGTG CCTATGCGTG ACATCGAGGA CAAGCACTGG
GTGGAGGTGT ACGTGCGCTC GCGCGAACGC TACGACTGGG GTCTGCTGCA GATGGACTAC
GACCGCGTGC TCGACATGAG TGACGAACGC GTGGCACGGG ACTATCGCTC GGTCTATAAC
GGCCCTGATT CGCTGGACCG GCAACTCGGG GCGAACGCGC AGCGGCGCAT CCGCATCCTC
TCGACGACGC TCGTGCCCGA TGAACCTGGG CGCGCGGTCG TGCATATCGA GCGCACGACA
TGGAAGAACG GTATCGACAA TGCCGAGCCG CCACAACGCT TCGTCATCAC GCTTGCCTTC
ACCTACCGGC CATCCGTCTT CACGCGTGAG CGCACGGCCA TCGAGAACCC GTTCGGCTTC
AGGGTAACCG CCTACAGCCG CGATTCCGAA TACACGCCTG CTGCGCCGTT GCCGGCATCG
TTGCCCACAT TGGCACCCGC TTCGGGAGGT GCGCGATGA
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| Protein sequence | MSSEHDGRDA GDSLGDYRRA LDFEVSVTHL QERSERRAWH VALACVTVAI LCAVALAVMV
PFYRVVPLPI EVDRLTGEAQ VIDVLDSKQV PMRDIEDKHW VEVYVRSRER YDWGLLQMDY
DRVLDMSDER VARDYRSVYN GPDSLDRQLG ANAQRRIRIL STTLVPDEPG RAVVHIERTT
WKNGIDNAEP PQRFVITLAF TYRPSVFTRE RTAIENPFGF RVTAYSRDSE YTPAAPLPAS
LPTLAPASGG AR
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