Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0165 |
Symbol | |
ID | 6281709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 179432 |
End bp | 180142 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619739 |
Product | P-type DNA transfer protein VirB5 |
Protein accession | YP_001893828 |
Protein GI | 187922186 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.572956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGGT CAATTGTGCA AACCGGCATC GTTCCCGTTG CGGCGGTGGT GATGATTGTC GGAACGATGC CATCGGCCCG TGCACAGGGC ATTCCGGTCT ACGACGCGCA GAACGTCCTG CAGGCCATTG CGACCGTCGG GCAACTGAAA CAGGAAGTGC AGCAGGAGCT TCAGCTGTAC CAGTCGCTCA GCGGCACACG CGGTTTTGGC GAGCTGATGA GTAATCCGGT CCTCTCCAAT TCGCTGCCGT CGAACTGGCA GTCCGTCTAT ACGTCCATCC AGAGCGGCGG CTATGCGGGC CTCACGGGCA GCGCGCAGAC CCTGCGCTCC GCGAGCGAAA TCTACAACTG CGAGGACCAG AGCGGCATCG ACCAGCAGGT CTGCCAGCGC GCACTGAACA AGCCATTCCA GGACAAGGCG TTCGGCACGC AGGCGTACCA GACCGAACTG CAGGAGCTCG ACCAGATCCA GGGGCTGATG CAGCAGATCG ACGTGACGCA GGACCAGAAG GGTATCGCGG AACTCCAGGC GCGCATCCAG ACCGAGAGCA CGGCGGTCGG CAATGAGATG ACGAAGCTGC AGCTCTTCAG GATGCTGGCC GACACCGAAG ACCGGCTCAT TGGCGAGCAG CAGCAGGAAC TCGTGCTCAA GCGCGCAGGC AACACTGCCC GGCTGCAGGA CCAGATGGTG CCTGCGGGCT TTGGCAACTG A
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Protein sequence | MIRSIVQTGI VPVAAVVMIV GTMPSARAQG IPVYDAQNVL QAIATVGQLK QEVQQELQLY QSLSGTRGFG ELMSNPVLSN SLPSNWQSVY TSIQSGGYAG LTGSAQTLRS ASEIYNCEDQ SGIDQQVCQR ALNKPFQDKA FGTQAYQTEL QELDQIQGLM QQIDVTQDQK GIAELQARIQ TESTAVGNEM TKLQLFRMLA DTEDRLIGEQ QQELVLKRAG NTARLQDQMV PAGFGN
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