Gene Bphyt_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0154 
Symbol 
ID6283898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp170907 
End bp171149 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content69% 
IMG OID642619728 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_001893817 
Protein GI187922175 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.77914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCG AGGACAGTAG CGCGGACAGG ATCCTGCGCC GTCGACAGGT CGAGGCGCGC 
ACGGGGTTGT CGCGCTCGAC CATTTACCGT CGTATGCAGG CCGGAACCTT TCCGCCGGCG
GTCGCGCTTG GCGGCCGGCT GGTCGGGTGG CGGCAGGCCG ATATCGAGGC GTTTCTCGCG
AACCCTGCCC GCTATCGTGT GCCGGCACGC CTTCGCGATG TGGGCGCGGG AGGCGCGCCA
TGA
 
Protein sequence
MSIEDSSADR ILRRRQVEAR TGLSRSTIYR RMQAGTFPPA VALGGRLVGW RQADIEAFLA 
NPARYRVPAR LRDVGAGGAP