Gene Bphyt_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0144 
Symbol 
ID6281890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp161980 
End bp162309 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID642619718 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001893807 
Protein GI187922165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000142855 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCG ATACAACTAC ATCGGATGCC GTCTTCCCTC GACGCCTGAA ACAGGCGCGA 
CAGCGCTCGG GCCTGACTCA AGAGCAGCTC GGCATCCAGG CGGGTATCGA CGAATTTTCT
GCCAGCACCC GCGTCAACCA GTACGAAAAG GGCAAACACA CCCCAGCCAT ACAGACCAGT
CAGCGTCTGG CGCGGGCGCT GCTCGTCCCT ACAGGCTTCC TCTACGAGGA CGACGATCTC
CTCGCGAGCC TGCTCGCAAT CGCCGGCAGG CTCAGCAAGG AAAAGAAGAG AGCCCTCCTC
GCCAGTGCAG AGAAACTGGC CCAGGAATAA
 
Protein sequence
MSRDTTTSDA VFPRRLKQAR QRSGLTQEQL GIQAGIDEFS ASTRVNQYEK GKHTPAIQTS 
QRLARALLVP TGFLYEDDDL LASLLAIAGR LSKEKKRALL ASAEKLAQE