Gene Bphyt_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0132 
Symbol 
ID6283336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp148981 
End bp149907 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID642619706 
Product3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein 
Protein accessionYP_001893795 
Protein GI187922153 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCCG ATCTCGGCAT AGCGCACGTC GCTTTTTATC TCCCCCCGTG CATCGACAAT 
ATCCGGGACT GGGGGCAACG TACCCGGCAG ACGATCGCCA CCGTGCGGAA ACTTGAGCAG
GCCGGAATGT ATAAGTACCG CAGTGCGAAC GGACAAACCG CAATTGGCCT GGCGGCCAGC
GCGGTTCAGC GCCTTCTCGT TGCGTCCGCT ATTGCGCCGC GTGAGGTCGA CTGCCTCGTC
TATGTTCACA CACTACAGGG CAGCATCGCG CCGCCGCCAC AGTCGTTGCC GGGCCTGCTG
TGTGACCGGT TCGGCTTCAG CAACGCTGAA GCCTTTTCGT TCGCGCAGCA GCATTGTGCG
TCGGGCCTTG GCGCACTGCG CGTGATCAGG GCAATGTTCG TCGCCCGCCC CCATATGAAA
CGGGTGCTGC TTGTCGGCGC CGACGTCATG CCGCTGGCAT CAGAAAGATT AATGATCGCC
GAAGGGATTC TGGGGGATGG TGCGTTTGCC GCCTTCATCG AGCGCGACGC TCCCATCAAC
CGCCTGGTGG CGATCACAAT GCATGCCACC GGCGCAGGCT GGCGAGGAGT GCTGGAACAA
GACGAATCGC GCCTGGCAGC ACAACACTTC TTCACGGCGC GCAGACTGAT CACACACACC
GCCCGGCAGG CACATATCGC ACTGGACGAT ATCCGTCGTA TCCTGCCGCA TCACCTTGAC
CTGCCTGCGT GGCACCGGTT GCTGGATTCG CTGCGGATTC CCAGGGACCG GCTGTTCTCG
GAGAACTTTT CGCGCATCGG GCACGTCACC GTCAGCGATG CATTCATCAA TCTTGCCCAG
TGTCACGACC TGGCGCCAGG GCAGCCATTC CTGCTGTTTG CAAGGGGTAT CGGTGGATTT
TCGGCAGTTG CACTGCTGGT CCGCTAG
 
Protein sequence
MIPDLGIAHV AFYLPPCIDN IRDWGQRTRQ TIATVRKLEQ AGMYKYRSAN GQTAIGLAAS 
AVQRLLVASA IAPREVDCLV YVHTLQGSIA PPPQSLPGLL CDRFGFSNAE AFSFAQQHCA
SGLGALRVIR AMFVARPHMK RVLLVGADVM PLASERLMIA EGILGDGAFA AFIERDAPIN
RLVAITMHAT GAGWRGVLEQ DESRLAAQHF FTARRLITHT ARQAHIALDD IRRILPHHLD
LPAWHRLLDS LRIPRDRLFS ENFSRIGHVT VSDAFINLAQ CHDLAPGQPF LLFARGIGGF
SAVALLVR