| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0126 |
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| Symbol | |
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| ID | 6282735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 143570 |
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| End bp | 144283 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642619700 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_001893789 |
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| Protein GI | 187922147 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCA TTGTCGCCGG CAGGCTTGAT GAGCTGCCAC CGGATATCCA TCGCCGTCTC
GGAGTCTTCC GCCACAAGGT CTTCGTCGAG CGCCTGCACT GGGAAATACC CGGCGTCCAC
CAGGATGCCA CAAGCGAGTG GGATGAGTTC GACGGAGCCA ATACTGTCCA TCTGGTCGCG
CTGTCAGGAG GCGGCGAGGT ATGTGGATGC GCCCGACTTA TGCCGACCAC TGGGCCCTAT
CTGCTCCGCA ACGTCTTTCC GGAACTTGCA GGTCCATGCC CCCTGCCGTC ATCCCCTTCG
GTATGGGAGA TGTCGCGATT CGCCGGTTCA GGGCTACCGG ATCGCCGGAC GGGCTCGACG
TCGGGCATGT CCCTGTTCCC GTATGCCATG GCGCTCGCCC TCTCGTTCGG CGCAACACGC
GTGATCGGCG TGGTCTCACG GCCTGTTGCC CGCCTGTACC GACGTTTCGG GCTGGAACTG
CACGATATGA ACGTTCATGC ATCCGCCCAT TCCGACATCG TTGCGTGCTC AATCGACCTG
GGGCTTCCCA CTTTCCAGAG ACTCCAGTGC GATCCGCTTA TATTGCTGGC CTCCGTCACC
CGCTTCGGAG AGCTATCCCT TCCCGAACCT TGCGAACATT CGGGGCATGC GTGCGATGAG
ATGTCCGGCG CAGTCTGTCG CGGAGGGGCG ACGCGCAAGC AGGCAACCGT TTAG
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| Protein sequence | MSFIVAGRLD ELPPDIHRRL GVFRHKVFVE RLHWEIPGVH QDATSEWDEF DGANTVHLVA
LSGGGEVCGC ARLMPTTGPY LLRNVFPELA GPCPLPSSPS VWEMSRFAGS GLPDRRTGST
SGMSLFPYAM ALALSFGATR VIGVVSRPVA RLYRRFGLEL HDMNVHASAH SDIVACSIDL
GLPTFQRLQC DPLILLASVT RFGELSLPEP CEHSGHACDE MSGAVCRGGA TRKQATV
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