| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0121 |
|---|
| Symbol | |
|---|
| ID | 6283107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 138700 |
|---|
| End bp | 139611 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642619696 |
|---|
| Product | protein of unknown function UPF0187 |
|---|
| Protein accession | YP_001893785 |
|---|
| Protein GI | 187922143 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTC GACCCCGAGA AAACTGGTTC CGTTTGCTGT TCGTCTGGAA CGGATCGGTC
CTCTCATCGA TCATTCCACA ACTGTGTTTC ATGGCGGTTG TGAGCACGCT TGCCGTGTTT
ACGCACGGCC GCGTGTTCGG GGAAAAGATT CCCCTTAATA CCGCGCCTTT TACGCTGTTC
GGTGTCGCAC TGGCTATCTT CCTTGCATTC CGAAACAATG CCAGTTATGA GCGCTTCAAC
GAAGCGCGGC ACCTCTGGGG CAATCTGCTG ATCGCGTCGC GATCGCTCAC TTCGCAGATA
CTCTGCTATG TTCCCGAACA TGCGGATACC TTGCGTATCG CAAAGCAAGT CATTGCCTTT
GTGTATACCC TCAAGCACGA ACTGCGTGCC ACCGATTCCA CGGCGGATAT TCAGCGTCTC
CTTGGTCGCG AACAGGCTGA GGAGTTGAGC GGGGTGGTCT ACAAGCCGAT GTTCATTCTC
AACAAGATAC GGCGTGAACT CACGGTTCCG AATCGCCGCA TCAACACGTC CGATGCGAAG
CTGTGGATGT TCGATGCGCA GCTCGACGAA CTTGGCAAGG CGTTGGGCGG ATGCGAGCGC
ATCGCCTCCA CGCCCATTCC TTTTGCGTAT AACGTCTTGC TACATCGGAC GGTCTATTCC
TATTGCGTAT TGCTGCCGTT CGGACTCGTG GATTCCACGG AGTTCTTTAC TCCGTTGCTC
TGTGTCTTCA TTTCCTATAC GTTGATCGCA CTTGAGGCGA TCGCGAGCGA AGTTGCCGAT
CCGTTCAGCG TTGCCCCCAA CGCGCTTGCG CTCGATGCGA TGTCGCGGAA TATTGAACGC
TCCGTACTCG AGCTATGCAG ATGTCCCATG CCCAAACCGG TTGTACCTGT TCGTCCTTAT
CAGCTTACGT GA
|
|---|
| Protein sequence | MIVRPRENWF RLLFVWNGSV LSSIIPQLCF MAVVSTLAVF THGRVFGEKI PLNTAPFTLF
GVALAIFLAF RNNASYERFN EARHLWGNLL IASRSLTSQI LCYVPEHADT LRIAKQVIAF
VYTLKHELRA TDSTADIQRL LGREQAEELS GVVYKPMFIL NKIRRELTVP NRRINTSDAK
LWMFDAQLDE LGKALGGCER IASTPIPFAY NVLLHRTVYS YCVLLPFGLV DSTEFFTPLL
CVFISYTLIA LEAIASEVAD PFSVAPNALA LDAMSRNIER SVLELCRCPM PKPVVPVRPY
QLT
|
|---|
| |