| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0102 |
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| Symbol | |
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| ID | 6280822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 115306 |
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| End bp | 117990 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642619679 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001893768 |
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| Protein GI | 187922126 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAACC CTTCTTTCGG TGAATCCTCC TGTACCGCCG CAGCCAGCGG CCTCGTGCAG
GTGCGGGGCG CGCGCGAACA CAATCTCAAG GACGTTGACG TCAACATCCC GCGCAACGCG
CTGGTGGTGT TCTCGGGTGT CTCCGGCTCC GGCAAGTCCT CGCTCGCCTT CGGCACCCTC
TATGCCGAGG CCCAGCGGCG CTACTTCGAG TCGGTGGCCC CCTATGCGCG GCGCCTGATC
GACCAGGCCG GCGTGCCCGA CGTCGATTCG ATCGACGGCC TGCCACCGGC GGTCGCATTG
CAGCAGCAAC GCGGCGCCAG CAATGCACGT TCTTCGGTAG GAAGCGTAAC CACCCTGTCC
AGCCTGGTGC GGATGATGTA TTCGCGTGCT GGCGCCTACC CGGCCGGTCA GCCGATGCTG
TACGCCGAAG ATTTTTCGCC CAACATGCCG CAGGGAGCAT GTCCGACCTG CCACGGTCTG
GGCCATGTGT ACGAGGTGAC CGAGGCCATC ATGGTGCCCG ATCCTTCCCT GACCATCCGC
GAGCGTGCAA TCGCCTCGTG GCCCCCCGCC TGGCAAGGGC AGAACCTGCG CGACATCCTG
GTCAGCATGG GCTATGACGT CGACCGGCCG TGGAAGGACC TGCCCAGGAG AGATCGCGAC
TGGATCCTGT TCACCGAAGA AACACCCACG GTGCCGGTGT ACGCGGGCTT CACGCCCGCT
GAAACCCGCG CCGCGCTCAA GCGCAAGCTG GAGCCGAGCT ACATGGGCAC CTTCACCGGC
GCCAGGCGCT ACGTGCTGCA CACCTTTGCC AACACCCAGA GCGCCCTGAT GAGAAAGCGC
GTCTCCCGGT TCATGGAAGG CAAGCCGTGC CCCACCTGCC ACGGCAAACG GCTCAAGCCC
GAAGCGCTGT CGGTCACCTT CGCCGGCGTG GACATCGGCG AGTTCATGCA GATGCCGCTG
GACCAGTTGG CAGCCTTGCT CGAACCCATC GCCCAGGGGG ATTTCCGCGC CCATGTGGCG
GGCGCGGGTA CGGACAGGGA AGCGACCCGG CGTGACCGCG CCGAACGCGC GGCCTCCGGC
CGCGCCGTCC ATTCGGTGTC GCCTGACGTG CGTCGCACCT CCGCGCTGTC GGAAGAAAAG
CGCCTTGCAG CGCAGCGGCT GGCTGGTGGC GTGATGGCAC GCCTGCGCCA ACTGCGCGGG
CTGGGCCTGG GTTACCTGAC GCTGGACCGG GCCACGCCGA CGCTTTCGGC CGGCGAGTTG
CAGCGCCTGC GGCTGGCCAC GCAATTGAGT TCCCTGCTGT TCGGCGTCGT GTACGTACTC
GACGAACCCT CGGCGGGGCT GCACCCCGCC GACAGTCAGG CTCTGTACGA CGCACTCGAC
AGGCTGCGCG ACGCGGGCAA CTCGGTGTTC GTTGTAGAGC ACGACCTGGA CCTGATGCGC
CGCGCACAAT GGCTCGTGGA CGTGGGGCCG GATGCTGGGG AGCGTGGCGG CCGCGTGCTG
TACAGCGGTG AGCCGGACGG CCTGCGACAG ATCGCCGAAT CGCGTACCGC GCGCTACCTG
TTCGACGAGA TCCCCGCGCC GGGCAGCCGG GCACGCGAAG CCAGCGACTG GCTGGAGTTG
CAGGGCGTCC ACCGCCACAA CCTGCATGGC GTGGATGCGC GCATTCCGCT AGGCGTGCTG
ACGGCCGTCA CCGGCATCTC CGGCTCGGGC AAGTCCAGCC TCGTCGCGCA GACCCTGCCG
GAACTGGTGC TGCTGCACCT GGGCCACGAG CCTGAAGACG ATGCGGCGGA AAGCGGAACC
GGTGAAGGGC CAGCGGTGAT CGAGGTCACC GGCGGTCATC TGGCCGGTGA CGTGGATGCC
GTGCAGCGTC TGGTGCAGGT GGACCAGAAG CCGATCGGGC GCACGCCTCG CTCGAACCTG
GCCACCTACA CGGGCCTGTT TGACCATGTG CGCAAGCTGT TCGCCGCCAC CCCCGATGCG
CGCCGCCGCC GCTATGACGC TGGCCGGTTC TCGTTCAACG TGGCCAAGGG GCGCTGCGAA
ACCTGCGAGG GCGAAGGCTT CGTCAGCGTA GAGCTGCTGT TCATGCCCAG CGTGTACGCG
CCGTGCCCGA CCTGCCATGG TGCACGCTAC AACGAGGCCA CGCTGAAGGT TCTCTGGAAA
GACCGCAACA TCGCCGAGGT ACTGCAGATG ACCGTGGACG AAGCCAGCGA ATTCTTTGCG
GGTGAAGACG CTGTGGCAAG GCCACTACAA CTGCTGCGCG ATATCGGACT GGGCTATCTG
CGCCTGGGAC AACCGGCCAC TGAGCTTTCC GGTGGCGAGG CGCAGCGCAT CAAGCTGGCC
ACCGAGCTTC AGCGCAGCCA GCGCGGACGC AGCCTGTACG TGCTCGACGA GCCGACCACC
GGGCTGCATG CGTCGGATGC CGACCGGCTG CTGGTGCAGT TGCAGCGCCT GGTCGATGCC
GGCAATACCG TGGTGATGAT CGAGCACGAC ATGCGGGCCG TGGCACAGGC CGACTGGGTG
ATCGACGTGG GACCCGGCGC GGGCGATGCC GGGGGCCGCG TGGTGGCCGC CGGCACCCCG
CCTCAGGTGG CACAGGTGCC GGATAGCCGG ACAGCGCCTT TTCTCGCCCA GGAACTGGCA
CGCACCGAAA CGGATGTCCA ACACGGACGC CGGAGACAGG GATAA
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| Protein sequence | MPNPSFGESS CTAAASGLVQ VRGAREHNLK DVDVNIPRNA LVVFSGVSGS GKSSLAFGTL
YAEAQRRYFE SVAPYARRLI DQAGVPDVDS IDGLPPAVAL QQQRGASNAR SSVGSVTTLS
SLVRMMYSRA GAYPAGQPML YAEDFSPNMP QGACPTCHGL GHVYEVTEAI MVPDPSLTIR
ERAIASWPPA WQGQNLRDIL VSMGYDVDRP WKDLPRRDRD WILFTEETPT VPVYAGFTPA
ETRAALKRKL EPSYMGTFTG ARRYVLHTFA NTQSALMRKR VSRFMEGKPC PTCHGKRLKP
EALSVTFAGV DIGEFMQMPL DQLAALLEPI AQGDFRAHVA GAGTDREATR RDRAERAASG
RAVHSVSPDV RRTSALSEEK RLAAQRLAGG VMARLRQLRG LGLGYLTLDR ATPTLSAGEL
QRLRLATQLS SLLFGVVYVL DEPSAGLHPA DSQALYDALD RLRDAGNSVF VVEHDLDLMR
RAQWLVDVGP DAGERGGRVL YSGEPDGLRQ IAESRTARYL FDEIPAPGSR AREASDWLEL
QGVHRHNLHG VDARIPLGVL TAVTGISGSG KSSLVAQTLP ELVLLHLGHE PEDDAAESGT
GEGPAVIEVT GGHLAGDVDA VQRLVQVDQK PIGRTPRSNL ATYTGLFDHV RKLFAATPDA
RRRRYDAGRF SFNVAKGRCE TCEGEGFVSV ELLFMPSVYA PCPTCHGARY NEATLKVLWK
DRNIAEVLQM TVDEASEFFA GEDAVARPLQ LLRDIGLGYL RLGQPATELS GGEAQRIKLA
TELQRSQRGR SLYVLDEPTT GLHASDADRL LVQLQRLVDA GNTVVMIEHD MRAVAQADWV
IDVGPGAGDA GGRVVAAGTP PQVAQVPDSR TAPFLAQELA RTETDVQHGR RRQG
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