Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0094 |
Symbol | |
ID | 6280781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 110165 |
End bp | 110578 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642619674 |
Product | protein of unknown function DUF132 |
Protein accession | YP_001893763 |
Protein GI | 187922121 |
COG category | [R] General function prediction only |
COG ID | [COG1569] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | [TIGR00305] probable toxin-antitoxin system toxin component, PIN family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGAT TGCGCGTCGT ACTCGATACC AATGTGCTGG TATCGGGGCT GGCCTATCCG GGTAGTGTGC CGGGACGCAT CGTTGCGGCT TGGCGGCAAG GTGGCCTGGA GGTGGCACTT TCGCATTACA TACTGGATGA AATGGTACGT GTATTGCCGC GTTTGCCAAA AGTCCAGATG ACTCCGGTGG AAATCCGCGA TCTGGCGGAC AGCTTCATGT TCCTGGCCGA CATAGTCGAA CCCGAAGCGA AGCAGGACGT GGCGCTGCGT GATCCCGCCG ACCAGCCTGT GCTGATGACT CTGATTGCAG CAAAGGCGCA GTATCTGGTC ACTGGAGACA AGGATCTGTT GGCCTTGTCG GACCGCTACG CGATCATTAC GCCAGCAGAG TTCTGGCAGC GGCACGGAGT CTGA
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Protein sequence | MSGLRVVLDT NVLVSGLAYP GSVPGRIVAA WRQGGLEVAL SHYILDEMVR VLPRLPKVQM TPVEIRDLAD SFMFLADIVE PEAKQDVALR DPADQPVLMT LIAAKAQYLV TGDKDLLALS DRYAIITPAE FWQRHGV
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