Gene Bphyt_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0088 
Symbol 
ID6284099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp106681 
End bp107841 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content65% 
IMG OID642619671 
Productputative major royal jelly-like protein 
Protein accessionYP_001893760 
Protein GI187922118 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.898622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCGCC GCACTTTCAT CGCCGCCGCA GCTGGCACAG CGCTCGTACC GGTGTTGGAC 
GCGACCGCTT TCGCTGGGAC TGTCTCCGGC GACACAGCAC CGGATGGTTC GTTCGAGATC
GTCGCCGCGT TTCCTGGTCC GGGTCCATCC GGCATCGCTG TAACGCCCGA GGGGCGGGTG
TTCGTGGGTT TCCCCCGGCA CGCTGATAAC CATCGCGAGG CGACGCTGGC GGAATTGAAG
GGCAATGTGC TGGTTCCCTA TCCCAACGCT GCCCTCAGCC TGCCCTCGGA CAAGCCGCCC
GAACAGCGCC TGATCTCGAT TCACGGCATG ACCACGGACA GTCGCGGCCG GCTATGGGCG
ATCGACGACG GCAAGCTCGC CGGACAACCG ATTGCGCCGG GGGCGGCCAA AGTGATCGGC
GTCGACCCAC ACTCGGATCG GTTGATCGCG AGCATCGTGC TGAAACCGCC GGCGATGCGC
CCCGACAGCC ACATGAACGA CTTGCGCATC GATTTGACCC ACGGCCCGCA GGGCGTCGCC
TACATCGCCG ATTCCTCGTT CGGCACATCG GGCGCACTGG TCGTGGTTGA CATCGCGACC
GAACGCCAAC GCCGCGTGCT GACCAATCAC CCGTCGACGC AACCGGAACA GGGATTCGTA
GCCGTGCTCG AAGGGCGGCC TCTGCGTTAC GACCCGGCGC ATCCCGGTTT CCCGGTGGGG
GGCGCGGACA GCGTCACGCT CAGTGCGGAC AGTTCGCGAC TCTACTACTC GCCGTTGACG
AGCCGCAGGC TGTACAGCAT CGCGACCGAC CTGCTGGCCG ATTTCGGTGC CACCGATGCG
GCCCTTGCAG CCGGCGTGGT GGACCACGGT GAGAAGGTGA TGACCGACGG CCTCGCGACC
GATATGCAGG ATCGTATCTA TCTCACCGCC GGCGAACACG ATGCCATCCT GCGTCGTTAT
CCGGACGGAC GCCTCGACGT GGTCGCGCGA GATCCCCGCA TCGTATGGCC GGACGGCATT
TTCGCCACGG CCACCCACGT CTATTGCACG TTGGGCCAGT GGGACCGGCT CCCGGGATTC
AACGGCGGCA AAGACCTTCG CGTGCCCCCG TACCTCCTGA TTCGTGTGCC GATCGATCAG
CCGTGTCCTC CTGTTGCCTA G
 
Protein sequence
MKRRTFIAAA AGTALVPVLD ATAFAGTVSG DTAPDGSFEI VAAFPGPGPS GIAVTPEGRV 
FVGFPRHADN HREATLAELK GNVLVPYPNA ALSLPSDKPP EQRLISIHGM TTDSRGRLWA
IDDGKLAGQP IAPGAAKVIG VDPHSDRLIA SIVLKPPAMR PDSHMNDLRI DLTHGPQGVA
YIADSSFGTS GALVVVDIAT ERQRRVLTNH PSTQPEQGFV AVLEGRPLRY DPAHPGFPVG
GADSVTLSAD SSRLYYSPLT SRRLYSIATD LLADFGATDA ALAAGVVDHG EKVMTDGLAT
DMQDRIYLTA GEHDAILRRY PDGRLDVVAR DPRIVWPDGI FATATHVYCT LGQWDRLPGF
NGGKDLRVPP YLLIRVPIDQ PCPPVA