Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0088 |
Symbol | |
ID | 6284099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 106681 |
End bp | 107841 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619671 |
Product | putative major royal jelly-like protein |
Protein accession | YP_001893760 |
Protein GI | 187922118 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.898622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGCGCC GCACTTTCAT CGCCGCCGCA GCTGGCACAG CGCTCGTACC GGTGTTGGAC GCGACCGCTT TCGCTGGGAC TGTCTCCGGC GACACAGCAC CGGATGGTTC GTTCGAGATC GTCGCCGCGT TTCCTGGTCC GGGTCCATCC GGCATCGCTG TAACGCCCGA GGGGCGGGTG TTCGTGGGTT TCCCCCGGCA CGCTGATAAC CATCGCGAGG CGACGCTGGC GGAATTGAAG GGCAATGTGC TGGTTCCCTA TCCCAACGCT GCCCTCAGCC TGCCCTCGGA CAAGCCGCCC GAACAGCGCC TGATCTCGAT TCACGGCATG ACCACGGACA GTCGCGGCCG GCTATGGGCG ATCGACGACG GCAAGCTCGC CGGACAACCG ATTGCGCCGG GGGCGGCCAA AGTGATCGGC GTCGACCCAC ACTCGGATCG GTTGATCGCG AGCATCGTGC TGAAACCGCC GGCGATGCGC CCCGACAGCC ACATGAACGA CTTGCGCATC GATTTGACCC ACGGCCCGCA GGGCGTCGCC TACATCGCCG ATTCCTCGTT CGGCACATCG GGCGCACTGG TCGTGGTTGA CATCGCGACC GAACGCCAAC GCCGCGTGCT GACCAATCAC CCGTCGACGC AACCGGAACA GGGATTCGTA GCCGTGCTCG AAGGGCGGCC TCTGCGTTAC GACCCGGCGC ATCCCGGTTT CCCGGTGGGG GGCGCGGACA GCGTCACGCT CAGTGCGGAC AGTTCGCGAC TCTACTACTC GCCGTTGACG AGCCGCAGGC TGTACAGCAT CGCGACCGAC CTGCTGGCCG ATTTCGGTGC CACCGATGCG GCCCTTGCAG CCGGCGTGGT GGACCACGGT GAGAAGGTGA TGACCGACGG CCTCGCGACC GATATGCAGG ATCGTATCTA TCTCACCGCC GGCGAACACG ATGCCATCCT GCGTCGTTAT CCGGACGGAC GCCTCGACGT GGTCGCGCGA GATCCCCGCA TCGTATGGCC GGACGGCATT TTCGCCACGG CCACCCACGT CTATTGCACG TTGGGCCAGT GGGACCGGCT CCCGGGATTC AACGGCGGCA AAGACCTTCG CGTGCCCCCG TACCTCCTGA TTCGTGTGCC GATCGATCAG CCGTGTCCTC CTGTTGCCTA G
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Protein sequence | MKRRTFIAAA AGTALVPVLD ATAFAGTVSG DTAPDGSFEI VAAFPGPGPS GIAVTPEGRV FVGFPRHADN HREATLAELK GNVLVPYPNA ALSLPSDKPP EQRLISIHGM TTDSRGRLWA IDDGKLAGQP IAPGAAKVIG VDPHSDRLIA SIVLKPPAMR PDSHMNDLRI DLTHGPQGVA YIADSSFGTS GALVVVDIAT ERQRRVLTNH PSTQPEQGFV AVLEGRPLRY DPAHPGFPVG GADSVTLSAD SSRLYYSPLT SRRLYSIATD LLADFGATDA ALAAGVVDHG EKVMTDGLAT DMQDRIYLTA GEHDAILRRY PDGRLDVVAR DPRIVWPDGI FATATHVYCT LGQWDRLPGF NGGKDLRVPP YLLIRVPIDQ PCPPVA
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