| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0083 |
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| Symbol | |
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| ID | 6282053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 102962 |
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| End bp | 104251 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642619668 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001893757 |
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| Protein GI | 187922115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACCC AACGAGGCAA CCTGCCCAAA CCGGCCGGCC GGACCGCAAA GCTCACGGTC
TACGCGCTCG GCGTCGCGGC GGTCCTTGCC TGCGGGGCGG CGCGCTCCGC GGAGGTCGAG
GTGTTGCACT ACTGGACGTC CGGTGGCGAA GCAAAATCGG CCCAGGTCCT CAAGCAGATG
CTTGATGAAA AAGGCGATAC CTGGAAGGAT TTCGCCGTTG CCGGCGGTGG CGGAGGAAAC
GCGATGACCG CGCTCAAGAC GCGCGTGATC GCAGGCAATC CGCCCGCTGC AGCCCAGATC
AAGGGGCCCG CCATTCAGGA GTGGGGAGAC GAAGGCGTGC TCGTGTCGAT CAACGACGTG
GCGAAGCGCG AAGGCTGGGA CAAGCTGATT CCGCCGCAGA TTTCGGGCAT CATGAAGTAC
AAGGGACAAT ATGTAGCGGC GCCGGTCAAC GTGCATCGTG TCAACAGGCT ATGGATCAAT
GCGGACGCGC TGAAGAAGGT GAACGCGCAG CCGCCCGCCA CGTGGGACGA GTTCTTCCGG
ACTGCCGAAG CACTGCAGAA AGCGGGCATC ACGCCGGTCG CGATCGGTGG CCAGCAATGG
CAGGACGCCG AAACCTTCGA GACCGTGGCG CTCGGTGTGG GCGGTGCGGC CTTTTACGAG
AAGGCGTTCG TGCAACTCGA TCAGTCGACC CTCAGGGGGC CGACCATGGT CAAGGCGCTC
GAAACGTTCA AGAAAATCAA GGCCTATACC GACAAGGCTC AGACGGGGCG CGACTGGAAT
CTGGCGACCG GCATGGTGAT CTCCGGTAAG GCGGCGATGC AGTTCATGGG GGACTGGGCC
AAGGGCGAGT TCAGCGTAGC CGGGAAGGTG CCGGGCAAGG ACTATCTGTG CGTACCAGCT
CCCGGTTCGC AAAACGCCTA TACGTTCAAC GTCGACAGCT TCGCGTTCTT CAAGGTCAGG
AGCGCGGATG TCGAGAAGGG GCAGAAGGAT CTCGCGAGCC TGCTTCTTAG CCCGAAGTTC
CAGGAGATAT TCAACCTCAA CAAGGGCTCG ATTCCCGTGC GGCAAGGCAT GGATCTGTCG
AAGTTCGACA CCTGTGCGCA GCGTTCCGCT GCCGATTTCA CCAGCGCGCA GGCGAAGGGA
ACGCTGGTGC CGTCGTGGGC GCATGACATG GTCGATACGC CGGCGGTGGA AGGTGCCTTT
TACGACGTGA TCGGCAACTT CTGGAACGAC GACAACGAAA GCGCGCAGCA AGCCGCGGAC
AAGCTCGCCG TTGCGGCAAA AACTCGCTGA
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| Protein sequence | MRTQRGNLPK PAGRTAKLTV YALGVAAVLA CGAARSAEVE VLHYWTSGGE AKSAQVLKQM
LDEKGDTWKD FAVAGGGGGN AMTALKTRVI AGNPPAAAQI KGPAIQEWGD EGVLVSINDV
AKREGWDKLI PPQISGIMKY KGQYVAAPVN VHRVNRLWIN ADALKKVNAQ PPATWDEFFR
TAEALQKAGI TPVAIGGQQW QDAETFETVA LGVGGAAFYE KAFVQLDQST LRGPTMVKAL
ETFKKIKAYT DKAQTGRDWN LATGMVISGK AAMQFMGDWA KGEFSVAGKV PGKDYLCVPA
PGSQNAYTFN VDSFAFFKVR SADVEKGQKD LASLLLSPKF QEIFNLNKGS IPVRQGMDLS
KFDTCAQRSA ADFTSAQAKG TLVPSWAHDM VDTPAVEGAF YDVIGNFWND DNESAQQAAD
KLAVAAKTR
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