| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0078 |
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| Symbol | |
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| ID | 6281106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 96224 |
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| End bp | 97567 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642619663 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001893752 |
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| Protein GI | 187922110 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACACT ATCTTTCCCG CCTGCGCTCG CGTGGCGAAC TGCTGACCGT CAAGCGCGAG
GTCGATCCGC GCTACGAGAT TGCTGCGGTC GCGCGGCGGC TGCAGGACGA AACGACAAAG
CCGGTGCTCT TCACAAACGT GCGTGGCAGC TCTCTGCCCG TGTTGATGAA TCTGTACACA
GACCACGAGC GACTGCGTGA GATCATCCGT TGTGAGGCCG ACGAAACGTT CTGCGCACGG
CTCGATCGCG AAATCTCTCT CGCTGCGACG CTCGAGACGC CGACCGAGCG CGTCGCGGCG
CCTACCGACT GGGTCACGGG CAAGCTCTCC GACCTGCCGA TCCCCACTTA TCACGCGCGG
GATGGCGCGC CGTACATTAC AGCCGGCGTG TTTCTCGCGA AGGACCCCGC CAGCGGGCGT
GCGAATCTCT CGTTCCATCG CTCGATGGTC ATTTCAGACG ACGAACTGCG CATCCGGCTC
GGCAGTACAC ACGATCTCGC GCGCTTCCAG CAGCAGGCCG AAGCGCGTAA CGAACCACTC
GAAGCAGCCA TCCTGATCGG CGCCGACCCG GAAATATTCA TGAGCGCATG CGTGTCGCTG
CCGCCCGACG GCAACGAGCT TGCGCTTGCG GCGGCCATGC GCGGCGGCCC GATCGCGATG
CGCCCGGCGC GCACGATCGA TCTGGACGTG CCAGTCTCAG CAGAGATTGT GATCGAAGGG
CGCATTTTGC CCAATATGCG CCGGCCCGAA GGTCCATTCG GCGAATTCAT GGGCTACTAC
GTCGAAGTGG GCGACAACCA TGTGTTCGAA ATCACCCACG TCGGCTGGCG CGAGGGCGCA
GTCTTTCAAG GCCTGATCTG CGGATCGCAC GAGGATCTTC GCCCGCTCGA GGCCGCCACC
GCCGCGCGTA TCTACAAGGC CATTTCGAGC CAGGTGCGTG GTGTACTCGA CGTGAGCTGC
CGCCCCACCG TCATGAATAC AGTCATCAAG CTCGACAAGC AATACGAAGG CCACGCGCAG
CACGCGCTGC TGGCCGCGCT CGGCTCGCAC CTCGACTACA ACAAGCTCGT CATTGTCGTG
GACAAGGACG TTGACATCTA CAACATGGAA GACGTGATCT GGGCGTTTCT CACGCGCGGA
CGCGCCGATA CGCGCACGAT GGTAATCCAT GACGTGCCGG GCTTCTATCG CGATGCGCAC
AAGGACCATT GGGGCCGTCT CGCGATCGAC GCCACACGTC CGTGGGGCCG CGAAGCGGAG
TTCGAACGCA AGACCATTCC CGGAGCCGGG CAGATCGTGC TCGACGACTA CCTGCCGCAT
TTCTCCGCGC GGGCGGCGAC ATGA
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| Protein sequence | MRHYLSRLRS RGELLTVKRE VDPRYEIAAV ARRLQDETTK PVLFTNVRGS SLPVLMNLYT
DHERLREIIR CEADETFCAR LDREISLAAT LETPTERVAA PTDWVTGKLS DLPIPTYHAR
DGAPYITAGV FLAKDPASGR ANLSFHRSMV ISDDELRIRL GSTHDLARFQ QQAEARNEPL
EAAILIGADP EIFMSACVSL PPDGNELALA AAMRGGPIAM RPARTIDLDV PVSAEIVIEG
RILPNMRRPE GPFGEFMGYY VEVGDNHVFE ITHVGWREGA VFQGLICGSH EDLRPLEAAT
AARIYKAISS QVRGVLDVSC RPTVMNTVIK LDKQYEGHAQ HALLAALGSH LDYNKLVIVV
DKDVDIYNME DVIWAFLTRG RADTRTMVIH DVPGFYRDAH KDHWGRLAID ATRPWGREAE
FERKTIPGAG QIVLDDYLPH FSARAAT
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