Gene Bphyt_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0048 
Symbol 
ID6284000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp60797 
End bp62173 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content59% 
IMG OID642619633 
Productaminotransferase class-III 
Protein accessionYP_001893722 
Protein GI187922080 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACCC GGTCAACCAT TATGGACACG AATAGTTTCC GTCCTGAGAA CGCGGCAACA 
CTGGATGAAT ACACCCGCCA ACTTACGCAG AAGCGGGAGC AACTGCTGGG GGGTTCCTAT
CGGTTGTTCT ACAGAAAGCC CGTTCATCTC GTACGCGGCC AGCTGCAATA TCTTTGGGAC
GTTCACGGCG ATAAGTATCT GGACATGTAT AACAACGTCG CCAGCATCGG TCATTGTCAC
CCGGCCGTCA TAGCGTCGGT GCATGAGCAG ATGAAGCAGC TGAATACGCA TACCCGTTAT
CTGCACGAGC GAATCCTCGC CTACACGGAG GAACTGCTGA CCACGATGCC CTCCGAAATC
AGCAGGGCCA TGTACATGTG TACGGGCTCA GAGGCAAACG ACCTGGCGAT GCGGGTTGCA
CGTGCCTATA GCGGCGGCAC GGGAATCATT GTCAGCCGCG AGGCCTACCA TGGCACCAGC
TACCTGACCT CGGGCGCCTC GCCTGCGTTG GGCAGCGGCC AGCCGATTGA CCCGACAACC
CGCCTCATCC CAGCGCCGGA CCGCTATCGC GTCGACACGC CCGATCTGGG CCTGTGGTTC
GCGGCAGAGA TGCAAAAGCA GATCGACGAC ATGGCTGCCC AGGGTATCAG GTTCGCCGGA
TTTATGGCGG ATTCCATCTT TTCGTCGGAT GGCGTTTTGC CAGGCCCTGC AGGTTACCTT
CAGCCAGCGA TTGACGTGGT ACATCGCAAC GGTGGTATTT TCATCGCGGA CGAGGTTCAG
CCCGGTTTCG CACGGACAGG CGACGCCTTC TGGGGCTTCG CACGCCATGG CGTCGTTCCC
GACGTGGTGA CGATGGGCAA GCCAATGGGA AACGGTATCC CCGTGTCCGC CCTGTTCGCG
CGGGCGGAGG TGCTTGCCGC CTTTAGTGAT GAGATTCCGT ATTTCAACAC TTTTGGTGGC
AATCCGGTTT CCATGGCCGC GGCCCAGGCT GTGCTCAACG TCATTCGCGA GGAACGGCTT
CAAGAGCACA GTCAACAGGT CGGCGCACGT CTGCTCGGCG AGTTTTCCCG TCTGGCCGAG
CGCCACGAGT GCGTAGGGGA CGTGAGGGGG GCGGGGTTGT TTATCGGTTT CGAACTGGTT
ACGGACCGGG AGAGTAAAAC GCCGGACAAG GCTCGTGCGC TTGACGTCAT CGAGAACCTG
CGTGATCAAC GCGTGCTTAC CTCCGTGGCG GGCCCGCATG GAAATGTGCT CAAACTTCGG
CCGCCGCTGG CCTTTCAGGC TCAGGATATC GACTGGGTTG TGAGCGCACT GGATCAGGCG
CTCGTTGCTA CGGAACGTAA TGCATCATCC CGCGCGGTCA GGAGTCAGCT CAACTAA
 
Protein sequence
MGTRSTIMDT NSFRPENAAT LDEYTRQLTQ KREQLLGGSY RLFYRKPVHL VRGQLQYLWD 
VHGDKYLDMY NNVASIGHCH PAVIASVHEQ MKQLNTHTRY LHERILAYTE ELLTTMPSEI
SRAMYMCTGS EANDLAMRVA RAYSGGTGII VSREAYHGTS YLTSGASPAL GSGQPIDPTT
RLIPAPDRYR VDTPDLGLWF AAEMQKQIDD MAAQGIRFAG FMADSIFSSD GVLPGPAGYL
QPAIDVVHRN GGIFIADEVQ PGFARTGDAF WGFARHGVVP DVVTMGKPMG NGIPVSALFA
RAEVLAAFSD EIPYFNTFGG NPVSMAAAQA VLNVIREERL QEHSQQVGAR LLGEFSRLAE
RHECVGDVRG AGLFIGFELV TDRESKTPDK ARALDVIENL RDQRVLTSVA GPHGNVLKLR
PPLAFQAQDI DWVVSALDQA LVATERNASS RAVRSQLN