Gene Bphyt_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0045 
Symbol 
ID6283777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp57733 
End bp58674 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content55% 
IMG OID642619630 
ProductCholine/ethanolamine kinase 
Protein accessionYP_001893719 
Protein GI187922077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC CCGGAGATGC ACAGACAACT GATGAATTCA ACATCGAGTC CGTCATTCGC 
CGCGTGCCGG ATTGGGCGGA GCGGGCGATC CGCTATTCGC CTGTCAGCGG TGGAATTTCC
AACTCGAACT GGCGCGTGGA GGTTGCGAAC GGACACGAGA AAACCACGTA TTTCCTTAAG
GTCCCTGGCA TCGGGACGGA AATGTTCATC GATCGCCGCA CCGCGCATGA GGCAAGTGTG
CGCGCCGCTG AATGTGGTTA CGGTGCTCCG GTCTTCTCAT TTATGGAAGA CTGCGGCGTC
GAAATTTTCG AGTTCATGGA GGGATGGCAC TCGTCTTCGA ATCTCGACTT TCTGAATGGC
ACGGTACGGC ACAACGCGTT ACGGGCGCTG AAGGCGTTTA ACGACCAGCC ATTGCTAACG
CAGACGAAAA CCGTATTCAA CATGATCGAC GAGCATGAGG ACCAGCGCGG CACACTACGC
GCGGCGTGTC CGCTCGATCA CGAATGGTTG TGCCGGCAAT ACGCACGCGC ACGGCGGGCG
CTCGAGGCAT CCGGCGTCGA TCTCGCGCCA TGCATGAACG ATACGCTCGC GGGCAACTTC
ATGCTCGATG CAGCACATCG AGTCATGCTC GTCGATTTCG AATACGCGTC GAATAACGAC
CGGTACTACG AGCTTGCGAT GTGGTTCGGC GAGATGTTCT TCGATGAGCA GGTGGAGCTG
GAACTGATCG AGGAATATTT TGGGCGCGTT GGACCCAGGG AAATTGCACG TGTACAGCTC
TACAAAGCGC TGGCTGACCT TAAATGGTCG GCATGGGCGA TGGTGCAGCG TTCAGTCTCC
AGAATCGATT TTGATTTCTA TAAGTACGGG ATATGGAAGT ACATGCGAGC TCGCACTGTC
ATGCAGGATA TCAGATGGGA AAGCTGGCTA AGGCAGGTAT GA
 
Protein sequence
MKTPGDAQTT DEFNIESVIR RVPDWAERAI RYSPVSGGIS NSNWRVEVAN GHEKTTYFLK 
VPGIGTEMFI DRRTAHEASV RAAECGYGAP VFSFMEDCGV EIFEFMEGWH SSSNLDFLNG
TVRHNALRAL KAFNDQPLLT QTKTVFNMID EHEDQRGTLR AACPLDHEWL CRQYARARRA
LEASGVDLAP CMNDTLAGNF MLDAAHRVML VDFEYASNND RYYELAMWFG EMFFDEQVEL
ELIEEYFGRV GPREIARVQL YKALADLKWS AWAMVQRSVS RIDFDFYKYG IWKYMRARTV
MQDIRWESWL RQV