Gene Bphyt_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0044 
Symbol 
ID6283776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp56777 
End bp57727 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content60% 
IMG OID642619629 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001893718 
Protein GI187922076 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT CCTCCGAACA GGCACGCCTG ATCGAGGCAC TCGCCGATAC GGACCTGACT 
GCGCTCGAGT ATAGCTGCAG CGGACTTGGC GGTGTCGCGT CGCCGATGCG CCTCCGGACC
GAATGGGCGG GATTTCTCGT TCAAACAGGC GACGGCGAGA AACGATACGC GAAAGTGCTG
TACGACGATA TGCGTCCGCT GATCGATGTG GAGCAGACCG TACTCGCCAG CCGGGCGGCA
GCGTTGACCG GTGTCACGCC AGCTCTCTAT CTGGCCGATG TCGAGCGCGG TGTGTTGCTA
TTCGATGCGC TCCCGGACGA TGCGTGGCGG TGGGCACGGG TCGACGATCT CACTGCGCCT
GACCGACTCG AGCGTTTGTG GGATCTCAAG CGCAAGGTTC ATTGCGGACC GGATCCCGGA
TTTCACCGCT CGTTTGTGGC CGATATTGCC CGCCTGCGCG CACTGTGTGA TCGCGACGCC
GTCGTTCTGC CGTCAGGTCA TGAATGGCTC GACGAGTGCG TCGAAATGGC ATCGAGCGCG
CTCGAAAGTG GACGCGACAC CACCCCTGTC CCGCTACACG GTGACGGTGC AGCTTCAAAC
GTGATGGTTG GCCCTGACGA TACGCTGGCC CTGGTCGACT TTGATCGAGG TGGAACGGGC
GATGCCTGGT ACGACGTCGC TGTCGTTCTG AATGAGCTTT ACCAGTTTGA ACCGCAATGG
CGTGACGGAA TCAGGTTTTG GAGTGGTCAG TGTGAAGAAG CCGACTACGC ACGCTGCCGT
CTCTATGCGT TTGTTGACGA CTGGTACTGG ACGTTGTGGG GACTATGGCT TGGCACGACG
TCCTCGCGCC GCCTTGAGTT CACCAAGCTT TCTCAATGGA CACTACAGCG CTGTCGGCAG
ACGATTCGGG ACCCGCGTTT CGAGGGCTGG CTACGAGCAT TCAAAGGATA G
 
Protein sequence
MKTSSEQARL IEALADTDLT ALEYSCSGLG GVASPMRLRT EWAGFLVQTG DGEKRYAKVL 
YDDMRPLIDV EQTVLASRAA ALTGVTPALY LADVERGVLL FDALPDDAWR WARVDDLTAP
DRLERLWDLK RKVHCGPDPG FHRSFVADIA RLRALCDRDA VVLPSGHEWL DECVEMASSA
LESGRDTTPV PLHGDGAASN VMVGPDDTLA LVDFDRGGTG DAWYDVAVVL NELYQFEPQW
RDGIRFWSGQ CEEADYARCR LYAFVDDWYW TLWGLWLGTT SSRRLEFTKL SQWTLQRCRQ
TIRDPRFEGW LRAFKG