| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0042 |
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| Symbol | |
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| ID | 6283774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 54738 |
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| End bp | 55496 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642619627 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_001893716 |
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| Protein GI | 187922074 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCACTC AGCCACGTAT TCAGGAAATC CTGCGCTTGC TGGACGCGCA GCAGCGCGTG
AAAGCATCTG ATCTGGCAGC ACTTTTACTG GTTTCCGAAG AAACCATTCG ACGGGATTTC
AAATATCTTG AGTCGATCGG CAAACTCCGC CGGATTCACG GCGGCGCGAT TGCGCCAAGG
AGCAGCGAGG AGCAGCCGCT GCAGGTGCGC AGCCGACTTC AGACAAAGGC GAAGACCCAG
ATCGCCACGT GTGCGGCAGG ATTTGTCCAG GAGGGTATGG CAATTTTTCT TGATACCGGC
ACGACGACAT TTGCGATGGC GCAGGCGTTG ACGAGATTCA GCCGGTTACG GATTGTCACG
AACTCACTGG ATATCGCACA ACTCGTCGCG CAGCAAAGCG ACAACCATGT GGTCGTCACG
CCTGGTGATG TTCGCCGTAA CGACAATGCG CTGATTGGTC CTCATACGCT CGAATTTTCC
CGGCAGTTCC ACTACGACAT CGCGTTCATG GGAATCGGCG GCATCGACCT GGAACTCGGT
TTCATGGATT ACGAGGAACC CGAGGCAGTG TTGAGGCGGA CGCTCGCCAG GCATTGCGTA
CGAAGCGTGA TTCTCGCCGA CTACGGCAAG TTTGGCCATC GCACGTTCAT CAACACCCTG
CCATTCAGCG CAGTCACGAC TCTTGTCACG AATCTCCCGC CACCAGGAGA CTATCGTCAA
CGTATGGAAC AGGAACATGT CGACATACTC TATCCCTAG
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| Protein sequence | MLTQPRIQEI LRLLDAQQRV KASDLAALLL VSEETIRRDF KYLESIGKLR RIHGGAIAPR
SSEEQPLQVR SRLQTKAKTQ IATCAAGFVQ EGMAIFLDTG TTTFAMAQAL TRFSRLRIVT
NSLDIAQLVA QQSDNHVVVT PGDVRRNDNA LIGPHTLEFS RQFHYDIAFM GIGGIDLELG
FMDYEEPEAV LRRTLARHCV RSVILADYGK FGHRTFINTL PFSAVTTLVT NLPPPGDYRQ
RMEQEHVDIL YP
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