Gene Bphyt_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0032 
Symbol 
ID6281792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp43261 
End bp44049 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID642619619 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001893708 
Protein GI187922066 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC TCAAGCCTCT TTTGGCTCTG GCCTGTGCAT TCGCGTCGCT CGCGGCGTCG 
TCGGGTGCAA GCGCCGCCGA TACGCTGCGT TTCGGCCTCG AAGCGCAGTA TCCGCCGTTC
GAATCGAAAG GCCCGAACGG GGAGTTGCAA GGCTTGGATA TCGACGTCGG CAATGCGGTT
TGCGTGGCCG CCCATATGAC GTGCAAATGG GTCGAGACCT CGTTCGACGG GCTGATTCCC
GCGCTGCAGG GCCGCAAGTT CGACGCCATC AATTCGGCGA TGAACGCGAC CGACGCACGC
CGTCAGGCGA TCGATTTCAC TACCGTCGTG TATCGCGTGC CGACGCAGTT GATCGCGAAG
CGCGACAGCG GTCTGCTGCC GACGCCGGCC TCGCTGAAGG GCAAGCGCGT GGGCGTGTTG
CAGGCGTCGA TTCAGGAAAC CTACGCGAAG GCGCATTGGG AATCGGCGGG CGTGACCGTC
GTGCCGTATC AGGACCAGAA CCAGGTTTAT ACGGATCTCG TGGCGGGGCG TCTGGACGCG
ACGCTCGTGC TGGCGCCGGC CGGACAAACC GGCTTTCTGT CGAAGCCGAG CGGTGAAGGT
TACGCTTTCG TCGGCGAACC GGTGCGCGAC GACAAGATTC TCGGCAGCGG CATTGCATAC
GGAATTCGCA AGGGCGATAC GGCATTGCGT GACCGCTTGA ATGCGGCGAT TGCCAAGGTG
CAAGCCGACG GCACGGTGAA GACGCTGGCC GCGAAATATC TCGGCAACAT CGACGTGTCG
GCGAAATAG
 
Protein sequence
MKLLKPLLAL ACAFASLAAS SGASAADTLR FGLEAQYPPF ESKGPNGELQ GLDIDVGNAV 
CVAAHMTCKW VETSFDGLIP ALQGRKFDAI NSAMNATDAR RQAIDFTTVV YRVPTQLIAK
RDSGLLPTPA SLKGKRVGVL QASIQETYAK AHWESAGVTV VPYQDQNQVY TDLVAGRLDA
TLVLAPAGQT GFLSKPSGEG YAFVGEPVRD DKILGSGIAY GIRKGDTALR DRLNAAIAKV
QADGTVKTLA AKYLGNIDVS AK