Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0032 |
Symbol | |
ID | 6281792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 43261 |
End bp | 44049 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619619 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_001893708 |
Protein GI | 187922066 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGC TCAAGCCTCT TTTGGCTCTG GCCTGTGCAT TCGCGTCGCT CGCGGCGTCG TCGGGTGCAA GCGCCGCCGA TACGCTGCGT TTCGGCCTCG AAGCGCAGTA TCCGCCGTTC GAATCGAAAG GCCCGAACGG GGAGTTGCAA GGCTTGGATA TCGACGTCGG CAATGCGGTT TGCGTGGCCG CCCATATGAC GTGCAAATGG GTCGAGACCT CGTTCGACGG GCTGATTCCC GCGCTGCAGG GCCGCAAGTT CGACGCCATC AATTCGGCGA TGAACGCGAC CGACGCACGC CGTCAGGCGA TCGATTTCAC TACCGTCGTG TATCGCGTGC CGACGCAGTT GATCGCGAAG CGCGACAGCG GTCTGCTGCC GACGCCGGCC TCGCTGAAGG GCAAGCGCGT GGGCGTGTTG CAGGCGTCGA TTCAGGAAAC CTACGCGAAG GCGCATTGGG AATCGGCGGG CGTGACCGTC GTGCCGTATC AGGACCAGAA CCAGGTTTAT ACGGATCTCG TGGCGGGGCG TCTGGACGCG ACGCTCGTGC TGGCGCCGGC CGGACAAACC GGCTTTCTGT CGAAGCCGAG CGGTGAAGGT TACGCTTTCG TCGGCGAACC GGTGCGCGAC GACAAGATTC TCGGCAGCGG CATTGCATAC GGAATTCGCA AGGGCGATAC GGCATTGCGT GACCGCTTGA ATGCGGCGAT TGCCAAGGTG CAAGCCGACG GCACGGTGAA GACGCTGGCC GCGAAATATC TCGGCAACAT CGACGTGTCG GCGAAATAG
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Protein sequence | MKLLKPLLAL ACAFASLAAS SGASAADTLR FGLEAQYPPF ESKGPNGELQ GLDIDVGNAV CVAAHMTCKW VETSFDGLIP ALQGRKFDAI NSAMNATDAR RQAIDFTTVV YRVPTQLIAK RDSGLLPTPA SLKGKRVGVL QASIQETYAK AHWESAGVTV VPYQDQNQVY TDLVAGRLDA TLVLAPAGQT GFLSKPSGEG YAFVGEPVRD DKILGSGIAY GIRKGDTALR DRLNAAIAKV QADGTVKTLA AKYLGNIDVS AK
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