| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0030 |
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| Symbol | |
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| ID | 6281790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 40276 |
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| End bp | 41679 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619617 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001893706 |
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| Protein GI | 187922064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTC CCACCACCGC CGGCGCGCCG TTTAGCCAGC TACCGCTGCC GCCCGCGACG
CTCGCCAACC TGACGCAGCT CGGCTACGTC GAGATGACGC CGATTCAGGC CGCAAGTCTG
CCGATCGCGC TCGCCGGCCA CGATCTGATC GCCCAGGCAA AAACCGGCAG CGGCAAGACC
GCGGCGTTTT CGCTGGCACT GCTGGCGCGT CTCGACGCAC GCAACTTCGC CGTGCAGGCG
ATGGTGCTGT GCCCCACGCG CGAACTCGCC GATCAGGTCA CGCAGGAAAT CCGCCGCCTC
GCGCGTGCCG AAGAAAACAT CAAGGTGCTG ACGCTGTGCG GCGGCACGCC GATGCGTCCG
CAAACGGCCA GCCTCGAACA CGGCGCGCAC ATCGTGGTCG GCACGCCGGG CCGCATCATG
GATCACCTTG AGCGCGGCAG CCTGCCGCTG CAGTCGCTCA ACACGCTGGT GCTCGACGAA
GCGGACCGCA TGCTCGACAT GGGTTTCTTC GACGATATCG CCACCGTCGT GAAGCAATGC
CCGAAAGAGC GCCAAACGCT GCTGTTTTCG GCGACGTATC CCGAGGGCAT CGTCAAACTA
AGCCAGCAAT TCCTGCGTAA TCCGAAGGAA GTGAAGCTCG CCGAACGGCA TGACAACACC
AAGATTCGTC AGCGGTTCTA TGAAGTAACC GAAGACGGAC GGCTGCATGC CGTCGGTCTG
CTGCTGAATC ACTATCGTCC GGTGAGCACG CTGGCGTTCT GCAACACCAA GCAGCAATGC
CGCGATCTGC TCGACGTGCT GCGCGCGCAG GGTTTTCATG CGCTCGCGTT GCACGGCGAA
CTCGACCAGC GTGAACGCGA CCAGGTGCTG ATCCAGTTCG CCAATCGCAG TTGCTCGGTG
CTGGTCGCCA CCGACGTCGC CGCGCGTGGT CTCGACATCG CGCAGCTCGA AGCGGTGATC
AACGTCGACG TGACGCCGGA TCCGGAAGTG CATGTGCACC GCATTGGCCG TACGGGCCGC
GCCGATCAGG AAGGCTGGGC GCTGAGCCTG GCGAGCATGA ACGAGATGGG CCGCGTCGGC
AGTCTCGAGC AGGCGCAAAA GCGCGAGGTG GAATGGCACA AGCTGTCCGA ACTCACCGCG
GCGAGCAATG AGCGGCTGCT GCCGCCCATG GAAACGCTGC AGATTCTCGG CGGCCGCAAG
GAAAAGATCC GTCCGGGCGA CGTGCTCGGC GCGCTGACCG GCGAGGCCGG TTTCGCCGGC
TCGCAGATCG GCAAGATCAA CGTGACGGAA ATGTCGACCT ATGTGGCTGT TGAACGCAGC
ATCGCGCGTG AGGCGCTGCG CAAGCTCAGC GCCGGCAAGG TGAAGGGCAA GAAAGTCAAA
GTCCGCATGA TGGACGACGC CTGA
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| Protein sequence | MNSPTTAGAP FSQLPLPPAT LANLTQLGYV EMTPIQAASL PIALAGHDLI AQAKTGSGKT
AAFSLALLAR LDARNFAVQA MVLCPTRELA DQVTQEIRRL ARAEENIKVL TLCGGTPMRP
QTASLEHGAH IVVGTPGRIM DHLERGSLPL QSLNTLVLDE ADRMLDMGFF DDIATVVKQC
PKERQTLLFS ATYPEGIVKL SQQFLRNPKE VKLAERHDNT KIRQRFYEVT EDGRLHAVGL
LLNHYRPVST LAFCNTKQQC RDLLDVLRAQ GFHALALHGE LDQRERDQVL IQFANRSCSV
LVATDVAARG LDIAQLEAVI NVDVTPDPEV HVHRIGRTGR ADQEGWALSL ASMNEMGRVG
SLEQAQKREV EWHKLSELTA ASNERLLPPM ETLQILGGRK EKIRPGDVLG ALTGEAGFAG
SQIGKINVTE MSTYVAVERS IAREALRKLS AGKVKGKKVK VRMMDDA
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