Gene Bphyt_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0021 
Symbol 
ID6282854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp31432 
End bp32826 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content61% 
IMG OID642619608 
ProductEthanolamine ammonia lyase large subunit 
Protein accessionYP_001893697 
Protein GI187922055 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACA CCGAGACGAT CGGCACCCGC ACGTATCGCT TTGCCGATCT GAAAACCCTG 
CTGGCGAAGG CCAGCCCGCA GCGTTCCGGC GACCAGCTCG CGGGCGTGGC GGCGGCGAGC
GAGGAAGAAC GTGTCGCGGC CAAGATGGCG CTGGCGCAAG TGCCGCTACG CACTTTCCTC
AACGAGGCGC TGATTCCCTA CGAAAGCGAC GAAGTCACGC GTCTCGTGAT CGACGATCAT
TCGCCGCAGG CATTCGCCGA GATCTCTCAC CTCACGGTCG GTGATTTTCG CAACTGGCTG
CTGAGCAGCA CGACGGATGC CGATGCGCTC ACGCGTATCT CCGCGGGCCT GACGCCGGAG
ATGGTCGCGG CCGTATCCAA GCTGATGCGC AATCAGGATC TGATCGCGGC GGCGCGTAAA
CGTCCGGTGA TTACGCGCTT TCGCAACACG GTCGGTTTAC CGGGGCACAT GTCGGTGCGT
CTGCAACCCA ATCACCCGAC CGACGACGTC AAAGGCATTG CCGCATCGAT GCTCGACGGC
CTGATGTACG GCTGCGGCGA CGCGATGATC GGCATCAACC CCGCCAGCGA CAATCTCGCC
GCGATCACCA AGCTGTTGCT GATGATCGAC GACTTCCGCC AACGTTATCA GGTGCCGACG
CAATCGTGCG TGCTGACTCA CGTCACCAAC ACGATTGCCG CAATCGAAAA AGGCGCGCCG
GTCGATCTGG TGTTTCAATC GATTGCGGGC ACAGAGAAAG CGAACGCGGG CTTCGGCATT
TCGCTCGCGC TACTGCAGGA AGCGTATGAA GCGGGACTCT CCTTGAAGCG CGGTACGGTC
GGCAATAACC TGATGTACTT CGAAACGGGT CAGGGCAGCG CGTTGTCGGC GGATGCACAT
TTCGGCGTGG ATCAACAGAC TTGCGAAGTA CGCGCCTATG CAGTCGCACG CAGGTTCAAT
CCATTCCTGG TCAACACGGT GGTCGGCTTT ATCGGCCCGG AATATCTCTA CGACGGTAAA
CAGATCACGC GCGCCGGCCT CGAAGATCAC TTCTGCGGCA AACTGCTCGG CGTGCCGATG
GGTTGCGACA TTTGCTATAC GAACCATGCG GAAGCGGATC AGGACGACAT GGACAATCTG
CTCACGCTGC TCGGCGTAGC GGGCATTAAC TTCATCATGG GCATTCCAGG CGCGGACGAC
GTCATGCTCA ACTACCAGAG CACGTCGTTC CACGACGCGC TTTACGTGCG CGACGTACTC
GGCTTGCGCC GCGCGCCGGA ATTCGAAGAA TGGCTGGAGT CGATGCAAAT CACCGACGCG
CGCGGCGCGT TGCTGAGTGC ATCGACGCAA CAACCGTTGC TGGAAGGCGC GCGCGACTGG
ATGGGCATTG CATGA
 
Protein sequence
MSYTETIGTR TYRFADLKTL LAKASPQRSG DQLAGVAAAS EEERVAAKMA LAQVPLRTFL 
NEALIPYESD EVTRLVIDDH SPQAFAEISH LTVGDFRNWL LSSTTDADAL TRISAGLTPE
MVAAVSKLMR NQDLIAAARK RPVITRFRNT VGLPGHMSVR LQPNHPTDDV KGIAASMLDG
LMYGCGDAMI GINPASDNLA AITKLLLMID DFRQRYQVPT QSCVLTHVTN TIAAIEKGAP
VDLVFQSIAG TEKANAGFGI SLALLQEAYE AGLSLKRGTV GNNLMYFETG QGSALSADAH
FGVDQQTCEV RAYAVARRFN PFLVNTVVGF IGPEYLYDGK QITRAGLEDH FCGKLLGVPM
GCDICYTNHA EADQDDMDNL LTLLGVAGIN FIMGIPGADD VMLNYQSTSF HDALYVRDVL
GLRRAPEFEE WLESMQITDA RGALLSASTQ QPLLEGARDW MGIA