Gene Bphyt_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0012 
Symbol 
ID6282545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp16121 
End bp18958 
Gene Length2838 bp 
Protein Length945 aa 
Translation table11 
GC content56% 
IMG OID642619599 
Producthypothetical protein 
Protein accessionYP_001893688 
Protein GI187922046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA CCGAACAAAA ATGCGCTAAC TGCGAGAAGA CAGGTTTGCC GATCCTTCCG 
GTGCGTTACA CCGTGCTACC GCAGACCGTG GGGGCGAAAC TGCCAGCAGG AATTAGCGGT
AAAGGCGTAA CGGATGTTTC TCTGACGGCG CATCACTACG GTCTGCGCAC ATTGCGCGAA
GGGTGGCTCT ACCTTTTCTA TGCGAAGGGC CCGCGTGGCA GCAACTACTG GGAAGCGTAC
ACGATAACCG AGGATGGACG CTTGTGGAAG CAGCCTCTGC CACTGATGAC TGCTCCGGCG
ATTCATCCCG CCTGCACTCA GAAGAGCATC GCTGCGCCAA TGGACATTAT CGCGATTGAA
CGTCCGGAAA AGTGCGGCGA CGTCTATATC GCCTTCTCCG AGTACCCATG GCACAAGGAC
ATCTTCAAAT TGTATGCGGG CGACGCGGCA CTTCGTGCGC AGCGCATGCA ACGGATCGAG
CCGGCGAAAT GGATCACAGG CGCAAAAGAT GAACACGCTG CGGTTGCGAC CGAACAGAGC
ATCGATGCCG TCGTCGAGTA CATGCCAGGT TTCGATCCCA AGTTGTTGCA ATTGCCAAAA
CAGAAAGTCA GCAACCCGAA CGGCAGTGTC AACGCGGACG TGTTGAAACA CGAAGCGACG
CGCTATCCGT TGCATATACG CCAGGCGACA CCGGCTTCAG CAAGCACCGC GCTTGTGAAA
CTGATGAATG GCGTTGGAGA AACCAAAGCG GGCAAGCATC ATCCCCCAAT GCTGTTGGCA
CTTTGGGACG GCATCGGCAA CGTGCACGAA CTGAACGGTT ATCGCAACGA CGCTGCCGTC
ATGATGACAC GCTATGTACA GGAATTGCCC AAAGAGATTG ATGCGTTGCA GTCGATCGAA
GCGGCAGAGG TTGCGGTAAA GAACGGTGCA GTTGCTTCTA AAAGCCGCTG GCGTTCGGCT
CGTCAAGCAG GTTGGGAAGC GATGATCAAT TCGCCCGGCG CGATGGATGG TATACCGACG
ATGCTGTCGC CCGAACAGGA AGCGGCGTCG GAGAAGAACA TCGAGGACGC GGGAAAGATC
AGCCCGGCGG AGGCTAAAGA GATCGGCGAG GCAGAGTGGC CGAAATATCT GGATAAGCTT
AACAAATCCA GGTTCCAGCA GTTTCGCGGC GCATTCCAAT CTATGCAAGC TACCGTGAAC
CAGTTACAGG CTGCCCGTAC GGCGGACGTG GCCGCATGGC TGAAAGCACC GCTGTTGCTT
GCGACCCTTC ACGATTACCA CGAGAACGAC ATTCCTAATG GTGCTGCGTT CGAGGGGGTG
GTGAACGAGG CGATTACTGG GCTGCCGTCT GAAGAGAAAG GCGCCCAGGT CGTGGTCGAT
CTGGTGAACA ACATGGATCC CACCCAGCCG ACGAGTCTGG TTTGGCGAGC CTTCGCGTTC
AACCAGAAAC AACCAAAAGT GGAAATTAAG GAATTGCTCG AAAAGGCGAC GGCGTACAAA
GCGTCGCGCG CAGAGGAGAT CGCGGAAATT CTCGAGAAGA TCGCCAAGCC GTTGGAGAAG
TTAAAAACGT TTGTCGAATT TCGCGAAAAA ATGGGCGAAG TCAAGGAACA CGAGTACGCG
ATCTCGGCTA CCGAGCGCGC CGTAAAAAAA CTGCAAGTCG ACCGGCTGAG CATTACGATC
GCCAATGCGC TTTTCAAGTG GACGGGGATG GGTAAAGTAA GCGACTGCGC GGGAGCATTC
CTGATACGCG GCGCGCTTAT GATGCGGGTC GGCATTAGCC AGACCGACAC CTTGGGCTTG
GTCAAGGAAT CGGCGAATGT CGAGCCGAAG TTGCGCGCCA AGCTGGAAAG TGGTTACCGC
GCGTTGCGCG CAAAGGGCGT GAAAGCTGCG GAGGCCTATG CACAAACGCT TGAGGCCTTG
GCCTCGGATG AAAGGGGGCT CGTGCTCCGG GCGAAGTGGA ACGCCGTCAG GCTGACGAGC
GAGGGCGCCG AAGCTGCGGC AGGGATTCGA ATCGGCGGAA CGTTGGCAAT CATTGAGCTG
TTTGGCTTTG GTGCGAGTCT GGCAAAAGTC GATAAGAGTG GGGAAGACTA TGCGATGCTC
GTGGCGAGCG GATTTTCAGC TTCATCTGCC TGTTTGCAAG CCTCCAGTAA AGCAATGGCG
GCGATGGCGA AAGATGCAGC CCAGACTGCG GCTAATTTAA AGGCCATCAC CGGTTATTTT
GGTGGCGCAT CGGCAGCGAT TGGCGCGTTC TTCGACGCGA AAAAAGGTGT GGCGCAAGCG
CAGGACAGCA AGATCTGCCT CGCGTCACTC TATTTCATTA AGAGCGGTTT GGGATTTACG
GCTGCCGCCG CTAACCTCTT GACGGCTCTA ACTTCAAGCG CGCCACTGAT CGCGAGGATC
ACCGGTGGGC GCGGTGTCGT TTGGCTAGGC AAAGCCAGTG CAGGCATGGC CGGAGCGACG
GCAAGAATCA CCAACCTGGC AACAACCGCC GAAGAAGGTA CGACGGCAGC TGCTCGGGCG
GCCGCAGCCA AGGCCGCCGG CAGAGAAGCA GTTGGTGTGG CAGCAGGAGA AGTTGTATTG
ACCGTTGGCG AGCGCGGTGC GCTGCTAATT ATTGGGCGAG TTGCACTCTT CATGGCAGGC
TGGGAGGTCG CTGTGGTAAT CACACTGATT CAAGTCCTGA TCTGGTACTT CTCGGATAAC
GATTTGCAGA GCTGGTTTGA AAAATGTACG TTTGGCAAGT CGCCGAATAG TCCTCCATGG
GAAGCGGGCA AGCAGCATGA GGAATTCGAA AAGGCACTCA AGAGCGTTGG GTTGACGGCA
AGTGAGGGTT CGGAATGA
 
Protein sequence
MATTEQKCAN CEKTGLPILP VRYTVLPQTV GAKLPAGISG KGVTDVSLTA HHYGLRTLRE 
GWLYLFYAKG PRGSNYWEAY TITEDGRLWK QPLPLMTAPA IHPACTQKSI AAPMDIIAIE
RPEKCGDVYI AFSEYPWHKD IFKLYAGDAA LRAQRMQRIE PAKWITGAKD EHAAVATEQS
IDAVVEYMPG FDPKLLQLPK QKVSNPNGSV NADVLKHEAT RYPLHIRQAT PASASTALVK
LMNGVGETKA GKHHPPMLLA LWDGIGNVHE LNGYRNDAAV MMTRYVQELP KEIDALQSIE
AAEVAVKNGA VASKSRWRSA RQAGWEAMIN SPGAMDGIPT MLSPEQEAAS EKNIEDAGKI
SPAEAKEIGE AEWPKYLDKL NKSRFQQFRG AFQSMQATVN QLQAARTADV AAWLKAPLLL
ATLHDYHEND IPNGAAFEGV VNEAITGLPS EEKGAQVVVD LVNNMDPTQP TSLVWRAFAF
NQKQPKVEIK ELLEKATAYK ASRAEEIAEI LEKIAKPLEK LKTFVEFREK MGEVKEHEYA
ISATERAVKK LQVDRLSITI ANALFKWTGM GKVSDCAGAF LIRGALMMRV GISQTDTLGL
VKESANVEPK LRAKLESGYR ALRAKGVKAA EAYAQTLEAL ASDERGLVLR AKWNAVRLTS
EGAEAAAGIR IGGTLAIIEL FGFGASLAKV DKSGEDYAML VASGFSASSA CLQASSKAMA
AMAKDAAQTA ANLKAITGYF GGASAAIGAF FDAKKGVAQA QDSKICLASL YFIKSGLGFT
AAAANLLTAL TSSAPLIARI TGGRGVVWLG KASAGMAGAT ARITNLATTA EEGTTAAARA
AAAKAAGREA VGVAAGEVVL TVGERGALLI IGRVALFMAG WEVAVVITLI QVLIWYFSDN
DLQSWFEKCT FGKSPNSPPW EAGKQHEEFE KALKSVGLTA SEGSE