Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0012 |
Symbol | |
ID | 6282545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 16121 |
End bp | 18958 |
Gene Length | 2838 bp |
Protein Length | 945 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642619599 |
Product | hypothetical protein |
Protein accession | YP_001893688 |
Protein GI | 187922046 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACGA CCGAACAAAA ATGCGCTAAC TGCGAGAAGA CAGGTTTGCC GATCCTTCCG GTGCGTTACA CCGTGCTACC GCAGACCGTG GGGGCGAAAC TGCCAGCAGG AATTAGCGGT AAAGGCGTAA CGGATGTTTC TCTGACGGCG CATCACTACG GTCTGCGCAC ATTGCGCGAA GGGTGGCTCT ACCTTTTCTA TGCGAAGGGC CCGCGTGGCA GCAACTACTG GGAAGCGTAC ACGATAACCG AGGATGGACG CTTGTGGAAG CAGCCTCTGC CACTGATGAC TGCTCCGGCG ATTCATCCCG CCTGCACTCA GAAGAGCATC GCTGCGCCAA TGGACATTAT CGCGATTGAA CGTCCGGAAA AGTGCGGCGA CGTCTATATC GCCTTCTCCG AGTACCCATG GCACAAGGAC ATCTTCAAAT TGTATGCGGG CGACGCGGCA CTTCGTGCGC AGCGCATGCA ACGGATCGAG CCGGCGAAAT GGATCACAGG CGCAAAAGAT GAACACGCTG CGGTTGCGAC CGAACAGAGC ATCGATGCCG TCGTCGAGTA CATGCCAGGT TTCGATCCCA AGTTGTTGCA ATTGCCAAAA CAGAAAGTCA GCAACCCGAA CGGCAGTGTC AACGCGGACG TGTTGAAACA CGAAGCGACG CGCTATCCGT TGCATATACG CCAGGCGACA CCGGCTTCAG CAAGCACCGC GCTTGTGAAA CTGATGAATG GCGTTGGAGA AACCAAAGCG GGCAAGCATC ATCCCCCAAT GCTGTTGGCA CTTTGGGACG GCATCGGCAA CGTGCACGAA CTGAACGGTT ATCGCAACGA CGCTGCCGTC ATGATGACAC GCTATGTACA GGAATTGCCC AAAGAGATTG ATGCGTTGCA GTCGATCGAA GCGGCAGAGG TTGCGGTAAA GAACGGTGCA GTTGCTTCTA AAAGCCGCTG GCGTTCGGCT CGTCAAGCAG GTTGGGAAGC GATGATCAAT TCGCCCGGCG CGATGGATGG TATACCGACG ATGCTGTCGC CCGAACAGGA AGCGGCGTCG GAGAAGAACA TCGAGGACGC GGGAAAGATC AGCCCGGCGG AGGCTAAAGA GATCGGCGAG GCAGAGTGGC CGAAATATCT GGATAAGCTT AACAAATCCA GGTTCCAGCA GTTTCGCGGC GCATTCCAAT CTATGCAAGC TACCGTGAAC CAGTTACAGG CTGCCCGTAC GGCGGACGTG GCCGCATGGC TGAAAGCACC GCTGTTGCTT GCGACCCTTC ACGATTACCA CGAGAACGAC ATTCCTAATG GTGCTGCGTT CGAGGGGGTG GTGAACGAGG CGATTACTGG GCTGCCGTCT GAAGAGAAAG GCGCCCAGGT CGTGGTCGAT CTGGTGAACA ACATGGATCC CACCCAGCCG ACGAGTCTGG TTTGGCGAGC CTTCGCGTTC AACCAGAAAC AACCAAAAGT GGAAATTAAG GAATTGCTCG AAAAGGCGAC GGCGTACAAA GCGTCGCGCG CAGAGGAGAT CGCGGAAATT CTCGAGAAGA TCGCCAAGCC GTTGGAGAAG TTAAAAACGT TTGTCGAATT TCGCGAAAAA ATGGGCGAAG TCAAGGAACA CGAGTACGCG ATCTCGGCTA CCGAGCGCGC CGTAAAAAAA CTGCAAGTCG ACCGGCTGAG CATTACGATC GCCAATGCGC TTTTCAAGTG GACGGGGATG GGTAAAGTAA GCGACTGCGC GGGAGCATTC CTGATACGCG GCGCGCTTAT GATGCGGGTC GGCATTAGCC AGACCGACAC CTTGGGCTTG GTCAAGGAAT CGGCGAATGT CGAGCCGAAG TTGCGCGCCA AGCTGGAAAG TGGTTACCGC GCGTTGCGCG CAAAGGGCGT GAAAGCTGCG GAGGCCTATG CACAAACGCT TGAGGCCTTG GCCTCGGATG AAAGGGGGCT CGTGCTCCGG GCGAAGTGGA ACGCCGTCAG GCTGACGAGC GAGGGCGCCG AAGCTGCGGC AGGGATTCGA ATCGGCGGAA CGTTGGCAAT CATTGAGCTG TTTGGCTTTG GTGCGAGTCT GGCAAAAGTC GATAAGAGTG GGGAAGACTA TGCGATGCTC GTGGCGAGCG GATTTTCAGC TTCATCTGCC TGTTTGCAAG CCTCCAGTAA AGCAATGGCG GCGATGGCGA AAGATGCAGC CCAGACTGCG GCTAATTTAA AGGCCATCAC CGGTTATTTT GGTGGCGCAT CGGCAGCGAT TGGCGCGTTC TTCGACGCGA AAAAAGGTGT GGCGCAAGCG CAGGACAGCA AGATCTGCCT CGCGTCACTC TATTTCATTA AGAGCGGTTT GGGATTTACG GCTGCCGCCG CTAACCTCTT GACGGCTCTA ACTTCAAGCG CGCCACTGAT CGCGAGGATC ACCGGTGGGC GCGGTGTCGT TTGGCTAGGC AAAGCCAGTG CAGGCATGGC CGGAGCGACG GCAAGAATCA CCAACCTGGC AACAACCGCC GAAGAAGGTA CGACGGCAGC TGCTCGGGCG GCCGCAGCCA AGGCCGCCGG CAGAGAAGCA GTTGGTGTGG CAGCAGGAGA AGTTGTATTG ACCGTTGGCG AGCGCGGTGC GCTGCTAATT ATTGGGCGAG TTGCACTCTT CATGGCAGGC TGGGAGGTCG CTGTGGTAAT CACACTGATT CAAGTCCTGA TCTGGTACTT CTCGGATAAC GATTTGCAGA GCTGGTTTGA AAAATGTACG TTTGGCAAGT CGCCGAATAG TCCTCCATGG GAAGCGGGCA AGCAGCATGA GGAATTCGAA AAGGCACTCA AGAGCGTTGG GTTGACGGCA AGTGAGGGTT CGGAATGA
|
Protein sequence | MATTEQKCAN CEKTGLPILP VRYTVLPQTV GAKLPAGISG KGVTDVSLTA HHYGLRTLRE GWLYLFYAKG PRGSNYWEAY TITEDGRLWK QPLPLMTAPA IHPACTQKSI AAPMDIIAIE RPEKCGDVYI AFSEYPWHKD IFKLYAGDAA LRAQRMQRIE PAKWITGAKD EHAAVATEQS IDAVVEYMPG FDPKLLQLPK QKVSNPNGSV NADVLKHEAT RYPLHIRQAT PASASTALVK LMNGVGETKA GKHHPPMLLA LWDGIGNVHE LNGYRNDAAV MMTRYVQELP KEIDALQSIE AAEVAVKNGA VASKSRWRSA RQAGWEAMIN SPGAMDGIPT MLSPEQEAAS EKNIEDAGKI SPAEAKEIGE AEWPKYLDKL NKSRFQQFRG AFQSMQATVN QLQAARTADV AAWLKAPLLL ATLHDYHEND IPNGAAFEGV VNEAITGLPS EEKGAQVVVD LVNNMDPTQP TSLVWRAFAF NQKQPKVEIK ELLEKATAYK ASRAEEIAEI LEKIAKPLEK LKTFVEFREK MGEVKEHEYA ISATERAVKK LQVDRLSITI ANALFKWTGM GKVSDCAGAF LIRGALMMRV GISQTDTLGL VKESANVEPK LRAKLESGYR ALRAKGVKAA EAYAQTLEAL ASDERGLVLR AKWNAVRLTS EGAEAAAGIR IGGTLAIIEL FGFGASLAKV DKSGEDYAML VASGFSASSA CLQASSKAMA AMAKDAAQTA ANLKAITGYF GGASAAIGAF FDAKKGVAQA QDSKICLASL YFIKSGLGFT AAAANLLTAL TSSAPLIARI TGGRGVVWLG KASAGMAGAT ARITNLATTA EEGTTAAARA AAAKAAGREA VGVAAGEVVL TVGERGALLI IGRVALFMAG WEVAVVITLI QVLIWYFSDN DLQSWFEKCT FGKSPNSPPW EAGKQHEEFE KALKSVGLTA SEGSE
|
| |