Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0007 |
Symbol | |
ID | 6280754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 10252 |
End bp | 11259 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642619594 |
Product | hypothetical protein |
Protein accession | YP_001893683 |
Protein GI | 187922041 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00121916 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATCGT TGAACTATCG CAACGCTAGT GCGCCGCGCG TCGCGGCCAA TACGAAAGAG CAAGGGGTTG AAGTTTCAGC CGTCGACCAG ACCGTCGGCA TGCTGAGGGC GTACTTCAGC CAACGCCCTG ATACGCATTG TCTGGTCGTG GTCGATCCAA GTCGACTCGG TTTCCCGGAG AGCCTGGAAC AAGAGATTCC TGTCTCCGAA CAACCGCACG CGATCGTAAC GATTGCGCAC GGAGCGTTTC CTGATGAGCA CCGTCCCTAC CTCGTCGAAC TCAATCTCTC GACTCCGGCC GGCGTGGAAT TGCTGACGGA AAGCGTACGC CTTGCATTCG AAGACCGGCA TCCGGACTCG ATAGCCCAAG GCCTCGGTCA GCGTATCGGC GGCTGGCTGG TCAGCAACGG GCCGGCGGAC GTCGTCGCCG CTTACTGGTC ACAACAAATA TTGCAGGCGG ATAACCGCGG GCGCCAATGC GCATTGCGCT TTTACGACTC GCGAGCGCTC AGTCTGCTTT GGCCGATGTT GTCACCCGGC CAGCGACAAG CGCTGCTAGG ACCGGTGAGC GCGTGGCACG CATTGGATGC GTGCGGCAAG CCCTGCATTT ACACGAGCAC GGATACGTCA CCAGCCGATC TGACGCTAAC CGATGCACAG TGGCAGGCAA CTCATCGTCA CGGGCTGATC AATCGGGCAC TCGGCCTGCA TATGCTGGCC GTGGAGCGGC AGCCCGATCC GCAGGAGGTC GAGGCCGCGG TCGCTAGCGC CGCGCGCGCG GAGCAATATG GTTTGAACGA TCGCGATGAC ATCATCGCGT TCATCGGTCA TGCGCTAGCC TGGCATCCGC TATTCGATCG ACATCCGAAA GTGACGCGGG CATTGCAACA GAGAGAACCG GACGACTTTT ATACGGCGGC TATCAGCGAA TTGACTCCGG ACGACATAGG AGAAATCCAG CGCGGTAATT GGTTTAACGA AAAGTCGCTT TCTTCAGCAG CACGGTAA
|
Protein sequence | MESLNYRNAS APRVAANTKE QGVEVSAVDQ TVGMLRAYFS QRPDTHCLVV VDPSRLGFPE SLEQEIPVSE QPHAIVTIAH GAFPDEHRPY LVELNLSTPA GVELLTESVR LAFEDRHPDS IAQGLGQRIG GWLVSNGPAD VVAAYWSQQI LQADNRGRQC ALRFYDSRAL SLLWPMLSPG QRQALLGPVS AWHALDACGK PCIYTSTDTS PADLTLTDAQ WQATHRHGLI NRALGLHMLA VERQPDPQEV EAAVASAARA EQYGLNDRDD IIAFIGHALA WHPLFDRHPK VTRALQQREP DDFYTAAISE LTPDDIGEIQ RGNWFNEKSL SSAAR
|
| |