Gene Bphyt_7398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7398 
Symbol 
ID6280641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010679 
Strand
Start bp112732 
End bp113697 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID642619577 
Producthypothetical protein 
Protein accessionYP_001893612 
Protein GI187922023 
COG category[L] Replication, recombination and repair 
COG ID[COG5534] Plasmid replication initiator protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACTTC CGGTCGACGC CCAGGCGGAT GCGGTGCCGC GTCGGAAGCG CAATGTTAGT 
CCACCGCAGC AGCTCGAACT GATTCTCGCG GACATGATCG ACGTCACGCC CAAAGACGAT
CTTGCGTCGA TGGAGATTCC GCTGTACAGC CTCTCGAAGC ATTCGGATAC GGAGCAGCGC
GTCTACCAGC GCGGCAACCG TACCGTGCGC GTCATTCCGT CCGGCGTAGG GGCCGCAACG
GTGTTCGACA AAGACCTCAT CCTGTACGTT GCCTCGCAGC TCGTGGAACG GCTCAACCGC
AACTTGCCAG TGTCGCGCAC AGTCCAGGTC GAATCGTTCG ATTTCTTGAA GGCGACGAGC
CGCGACACGA GCAGAAGTGG TTACGAAAGC ATTTTCAACA TGCTTCGTCG GCTTCGCGGT
ACGACTATCG AAACGAACAT CCCGACCGGC GGCAAAATCC AGACGGACGG CTTTTCGATC
ATCACCGACT ACTCTGTGAT TACTGGCAAG AAGAGCTACA ACAAGAAAAA GGACGAGCAT
ATCTTGCGCG TTCTTTCCTT CACCGTGACG CTCTCGGACT GGCTCTACAA CGGTCTTCTC
GAACTGGAAG TGCTTACGCT GAACCGGCAA TACTTCCAGC TCGGCAAGGC CATCGAGCGC
AAGCTATATG AAGTGGGCCG CAAACACTGC GGAACCGAAA AGGCGGTATG GGCCGTGGGC
ATCGACTTAC TGATGGAGAA GATCGGCTTT AGACGCGACC GTGCCAACTT CCGCGCCGAG
TTGCGCGAGA TCATCCGGGC CGACTCCCTG CCCGACTATC GCATCGCGCT CGATCACAGT
AAGCGTCCCG ATATGGTCGT TTTCTGTACG CGCAACGCGG CACTGCTATC GAAGTACATC
CGAAACGAAG GCTGCTACGA CTGGTTCAAC GCTCTCGAAA GCAAAGACAC CCTCGCCGCA
GCCTGA
 
Protein sequence
MALPVDAQAD AVPRRKRNVS PPQQLELILA DMIDVTPKDD LASMEIPLYS LSKHSDTEQR 
VYQRGNRTVR VIPSGVGAAT VFDKDLILYV ASQLVERLNR NLPVSRTVQV ESFDFLKATS
RDTSRSGYES IFNMLRRLRG TTIETNIPTG GKIQTDGFSI ITDYSVITGK KSYNKKKDEH
ILRVLSFTVT LSDWLYNGLL ELEVLTLNRQ YFQLGKAIER KLYEVGRKHC GTEKAVWAVG
IDLLMEKIGF RRDRANFRAE LREIIRADSL PDYRIALDHS KRPDMVVFCT RNAALLSKYI
RNEGCYDWFN ALESKDTLAA A