| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7359 |
|---|
| Symbol | |
|---|
| ID | 6280569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010679 |
|---|
| Strand | + |
|---|
| Start bp | 87086 |
|---|
| End bp | 88825 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642619538 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_001893573 |
|---|
| Protein GI | 187921984 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.88342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.88087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCTC GTAAGAATTA CCAGATGGCG ACGGCGACGC CAGAGGTGGT AATTGATATA
CATAGGGATG CACCCGTTCT TCCTGTGCAA CTGGGGGCGC GGAACCTTGA CTTTGAGCGT
TGGCGATTGG TGGGCGGCAG GTTGACAGGA AAGGACGCCA GCGAGGTATC AGCTGTTGAT
GCAGGGCGAC TGGAAATTGT CTGTGCGATG CGCGACGCGC TATCTCGTCT TGCGAAGACA
TTGTCACCCA ACAGCATTCT GACAATACAT CGTGGTGCAG TGCCACAGTG GTTCGCATTT
CTCGACGAAT TGGCTTTACA AGGACAGCCA ATTGTGAAGA TGAGCGACAT CACGAAGGAA
CTGCTCGAAG CCTATGTGTC ATGGCTACTG CGTAAGCCAG CAGAAACAGA GACGGGTGTC
CTGTCGTACG CGGCTGCCCG TGCGATCTAT TCGCAAACGA AGTCTGTCTT GTTGGAGTGC
GTCTGTACCG GCATTCTGAG CCGTGATTGC CTTCCGGTAA ATCCATTTCC GGGCAGCAAT
CGATCCAGTA GGGGGCATCA GTCATATTCC AAGGGCGAGA TGAGTCGGCT TCTCGCTGCG
CTTGCTGCAG ATCTGGCAGC GATTCGTGCC GGAGCTTTTG ATGAGGCCGA GAGCGACACG
CTTTTGGTTT ACCTCCTGTT GATCGCGGCA CGAACTGGCC GTAACCCTGC CCCGCTTCTT
GAATTGAGGC GTGATGCCCT TCAGCCGCAT CCGCTGAAAC CGGACAGTCA TGCTCTGCTG
ACAACGTACA AACGTCGTGG AAACAACATT GCCGTACAGT CGTTCCGGCG CAGCAAAGAA
ATTGAAGACG TTGCAACTGT GCAGACAGAT GTTGCTACCT TGTACCTTGA GATCCTCGCG
TTGACGGAGC GTCATGTTCG AAACGTACCT TCGGCCGATC AGGCACGGCT GTGGTTATGT
AGACGGCAGC CGAATGGCGG TTGGGGAGAT AAGGTGGCTC CAATCGACGC GTCGATGTTG
AAAGAGCTGA TTGATCGCTT TATAGGGCGT CATAGCCTTT TGTCTGACGA CGTGAATCCT
CGAACCGGCG AACCGTTGCC ACTGCGTGTG ACGATCATGC GGCTCAGAAA GACATTCGCA
ACCCGGATAT GGCGACTAAC GGGAGGGGAT CTGATCAGGG CTTCCACCGC CTTGGGAAAT
CAGCCCAGAA TGACCGACTC GCATTATCTC GCGGTTACGC CGGAGATGGA ACGCAACCAC
AAGTTCGTTG GGCTGTGCCT CGAAACACAA CTTCGCGGTG CCAGTGAAGA CCCTGAGGTC
CTGTTGAAAT TGGCGGACGA GATGCGGGTC CCAGTTGATG AAGTTCGGCG CGTCCTGTCC
GGCAAACACA ACACGGGCGT CGGGCGGTGC AGTTCGCCTT TCTATGGCAA ATTTGCGCCC
AAAACTGGAG AGCGGGTGTG CACATCATTC CTGCACTGCT TCCGGTGTCC CAATCAGGTG
GTGATGGAAA CCGACCTACA TCGCCTGTTC AGCTTTTACT GGTTGCTCAT CAAGGAGCGC
AATCTTCTTG GGCGTAACCG TTGGCACAAG GTGTACGGCT GGGTGATACG CGAGATCGAC
AGGGTGATCT CCGGTCGCTT TCCTGCAGAC ATTGTCCTCG CGGCACGGAC CAGCGCACAG
CTGGACCCTC ACCCGATGTG GCGCGAACGG TCGATCCTCG GAGGTGCGGG CAATGACTAA
|
|---|
| Protein sequence | MRPRKNYQMA TATPEVVIDI HRDAPVLPVQ LGARNLDFER WRLVGGRLTG KDASEVSAVD
AGRLEIVCAM RDALSRLAKT LSPNSILTIH RGAVPQWFAF LDELALQGQP IVKMSDITKE
LLEAYVSWLL RKPAETETGV LSYAAARAIY SQTKSVLLEC VCTGILSRDC LPVNPFPGSN
RSSRGHQSYS KGEMSRLLAA LAADLAAIRA GAFDEAESDT LLVYLLLIAA RTGRNPAPLL
ELRRDALQPH PLKPDSHALL TTYKRRGNNI AVQSFRRSKE IEDVATVQTD VATLYLEILA
LTERHVRNVP SADQARLWLC RRQPNGGWGD KVAPIDASML KELIDRFIGR HSLLSDDVNP
RTGEPLPLRV TIMRLRKTFA TRIWRLTGGD LIRASTALGN QPRMTDSHYL AVTPEMERNH
KFVGLCLETQ LRGASEDPEV LLKLADEMRV PVDEVRRVLS GKHNTGVGRC SSPFYGKFAP
KTGERVCTSF LHCFRCPNQV VMETDLHRLF SFYWLLIKER NLLGRNRWHK VYGWVIREID
RVISGRFPAD IVLAARTSAQ LDPHPMWRER SILGGAGND
|
|---|
| |